Re: [scipion-users] overriding config file SCIPION_USER_DATA value

[Pablo C. <pc...@cn...>]

Hi David, thanks Grigory.

Scipion deals with 2 config files:

1.- One common to all users that usually is at 
<SCIPION_HOME>/config/scipion.conf
This file contains common variables for the system, common to all users 
like path to java, or to MPI...

2.- One per user that by default is created at 
~/.config/scipion/scipion.conf
This file contains "user specific configurations"

So the way it is designed, each user will have all his/her projects 
created in the same folder and separately from the other users.

What is your case?

It doesn't fit in how Scipion works?

All the best, Pablo

Scipion team.



On 14/06/17 10:34, Grigory Sharov wrote:
> Dear David,
>
> SCIPION_USER_DATA is defined on a per-user basis in 
> ~/.config/scipion/scipion.conf , if you would like to have your 
> project in a different location, you could in principle create a 
> symlink in ~/ScipionUserData/projects/ folder.
> Is this what you are looking for?
>
>
> Best regards,
> Grigory
>
> --------------------------------------------------------------------------------
> Grigory Sharov, Ph.D.
>
> MRC Laboratory of Molecular Biology,
> Francis Crick Avenue,
> Cambridge Biomedical Campus,
> Cambridge CB2 0QH, UK.
> tel. +44 (0) 1223 267542 <tel:+44%201223%20267542>
> e-mail: gs...@mr... <mailto:gs...@mr...>
>
> On Wed, Jun 14, 2017 at 12:23 AM, Hoover, David 
> <hoo...@he... <mailto:hoo...@he...>> wrote:
>
>     Is there any way of setting the SCIPION_USER_DATA from either the
>     command line or via the environment to override the value in the
>     config files?  It seems there is no way to run multiple scipion
>     jobs simultaneously without clobbering the output.
>
>     David Hoover
>     HPC @ NIH
>
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