Re: [scipion-users] xmipp3 - optical alignment

[Carlos O. S. <co...@cn...>]

Dear Dmitry,


On 02/16/17 11:34, Dmitry Semchonok wrote:
> Dear colleagues,
>
> When you use *xmipp3 - optical alignment* what values you are using 
> for the GPU?
In principle, there is no difference in the parameters when using GPU or 
CPU.
>
> Is there also an option to run that process using the Threads/MPI?
We have not performed a scaling experiment, it would be interesting if 
you try and share the results. It would not matter if you use threads or 
Mpi, but use just one of them, like threads=2 and mpi=1 or threads=1 and 
mpi=2 (during development we always used threads=mpi=1).
>
>
> And do you *enable* /Use previous movie alignment t/o SUM frames  
> option if you*run**protocol*//upon/xmipp3 - correlation alignment?
> /
/Yes.

Kind regards, Carlos Oscar
/
> /
> /
> Sincerely,
> Dmitry
>
>
>
>
>
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Carlos Oscar Sánchez Sorzano                  e-mail:   co...@cn...
Biocomputing unit                             http://biocomp.cnb.csic.es
National Center of Biotechnology (CSIC)
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Campus Universidad Autónoma (Cantoblanco)     Tlf: 34-91-585 4510
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