[scipion-users] exporting/importing the coordinates

[Dmitry S. <sem...@gm...>]

Dear colleagues,

the new issue with exporting/importing the coordinates.


*What I have*==============================================================
I worked with it separately: Grid1 ----Motion correction
----CTF-----Particle picking---
                                        Grid2 ----Motion correction
----CTF-----Particle picking---

------------------------------///------------------------------------------

After I combined all autopicked particles in 1 file.

With this file I run till the end - 3d model (postprocessing).

As a result I got ~ 16000 good particles.
===============================================================



*What I want*
*===============================================================*
My idea is to work again with these good ~16000 particles.

>From info in particles file you can see the correspondent mrc files they
refer and create a "new" set of mrc.

So now I have the "new" set of mrc that I start processing from the
beginning (instead og Grid1..Grid2..)

The problem I faced is

to get the coordinate files for these ~16000 particles
to apply it for the "new" set of mrc that might contain these particles.


*So how can I*

get the 1 coordinate file where all my 16000 particles are listed and
to apply it to the "new" mrc set and
be able to move a boxes if now they are not centered.


I tried *xmipp - extract coordinates* protocol.

It works with old Grid1 Grid2......mrc sets but not with a "new" mrc one.



Thank you.

Sincerely,
Dmitry