[scipion-users] errors running xmipp3 - ctf_correct_wiener2d & xmipp3 - reconstruct significant

[Dmitry S. <sem...@gm...>]

Dear colleagues,

I have a problem with running

xmipp3 - ctf_correct_wiener2d
<https://github.com/I2PC/scipion/wiki/XmippProtCTFCorrectWiener2D>:

xmipp3 - reconstruct significant
<https://github.com/I2PC/scipion/wiki/XmippProtReconstructSignificant>:


I faced the following errors:

xmipp3 - ctf_correct_wiener2d
<https://github.com/I2PC/scipion/wiki/XmippProtCTFCorrectWiener2D>:
Protocol failed: Command 'srun  `which xmipp_mpi_ctf_correct_wiener2d`   -i
Runs/001129_XmippProtCTFCorrectWiener2D/input_particles.xmd  -o Runs/001129_
XmippProtCTFCorrectWiener2D/corrected_ctf_particles.stk
--save_metadata_stack
Runs/001129_XmippProtCTFCorrectWiener2D/corrected_ctf_particles.xmd
--pad 2  --wc -1.0  --sampling_rate 2.24' returned non-zero exit status 127


xmipp3 - reconstruct significant
<https://github.com/I2PC/scipion/wiki/XmippProtReconstructSignificant>
Protocol failed: Command 'srun  `which xmipp_mpi_reconstruct_significant`
-i Runs/001892_XmippProtReconstructSignificant/extra/input_classes.xmd
--sym c1 --angularSampling 5.000000 --minTilt 0.000000 --maxTilt 90.000000
--maxShift -1.000000 --dontReconstruct --angDistance 10.000000 --useImed
--odir Runs/001892_XmippProtReconstructSignificant/tmp/iter001 --alpha0
0.200000 --alphaF 0.200000 --numberOfVolumes 1' returned non-zero exit
status 127




Any suggestions?

Thank you.

Sincerely,
Dmitry