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#146 Summary of tickets 137-145

demo
closed
None
5
2021-08-07
2021-06-13
No

Below is the proposed hierarchy for the proposed terms.

The terms are motivated by user requests for more informative terms in BioSimulators/RunBioSimulations than the existing terms for continuous/discrete and spatial/non-spatial modeling.

SBO_0000004: modeling framework
    SBO_0000062: continuous framework
        SBO_0000292: spatial continuous framework
        SBO_0000293: non-spatial continuous framework
            deterministic non-spatial continuous framework
            stochastic non-spatial continuous framework
    SBO_0000063: discrete framework
        SBO_0000294: spatial discrete framework
            population-based discrete spatial simulation
            particle-based discrete spatial simulation
        SBO_0000295: non-spatial discrete framework
            population-based discrete non-spatial simulation
            particle-based discrete non-spatial simulation
    hybrid framework
        hybrid spatial framework
        hybrid non-spatial framework
            hybrid continuous-discrete non-spatial framework
                hybrid deterministic continuous-discrete non-spatial framework
                hybrid stochastic continuous-discrete non-spatial framework
            hybrid flux balance-continuous non-spatial framework
            hybrid flux balance-discrete non-spatial framework
            hybrid flux balance-logical-continuous non-spatial framework
            hybrid flux balance-logical non-spatial framework
            hybrid flux logical-discrete non-spatial framework          

Discussion

  • Jonathan Karr

    Jonathan Karr - 2021-08-07
    • status: open --> closed
    • assigned_to: Jonathan Karr
     
  • Jonathan Karr

    Jonathan Karr - 2021-08-07

    Added to SBO

     

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