[SOSlib-discuss] Installing problems: expat/xerces

[LOPEZ G. DE L. A. <al...@im...>]

Hi all,=20

I'm trying to install odeSolver on my Red Hat 9.0 machine and I have =
some problems at the configuration step. I have installed libSBML (with =
expat, not xerces!!!) and Sundials with no apparent errors. While I =
execute ./configure I get this:


[root@nerium SBML_odeSolver-1.6.0]# ./configure
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking for g++... g++
checking for C++ compiler default output file name... a.out
checking whether the C++ compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of g++... gcc3
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking dependency style of gcc... gcc3
checking how to run the C preprocessor... gcc -E
checking for ranlib... ranlib
checking for a BSD-compatible install... /usr/bin/install -c
checking whether make sets $(MAKE)... (cached) yes
checking for autoconf... /usr/bin/autoconf
checking for aclocal... /usr/local/bin/aclocal
checking for make... /usr/bin/make
checking for ar... /usr/bin/ar
checking for swig... /usr/bin/swig
checking for perl... /usr/bin/perl
checking for SBML Library headers... yes
checking for SBML Library... yes
configure: found SBML Library Version 2.3.4
checking correct functioning of SBML... no:
                   CFLAGS=3D-g -O2 -I/usr/local/include =
-I/usr/local/include/sbml
                   LDFLAGS=3D -Wl,-rpath,/usr/local/lib -L/usr/local/lib
                   LIBS=3D -lxerces-c -lsbml
configure: error: Can not link to SBML Library:
                  Please, make sure to use libSBML version >=3D 2.3.2

Seems to be trying to call libSBML with LIBS=3D-lxerces-c which I do not =
have. I've tried=20

 ./configure LIBS=3D-lexpat

instead, but the error was very similar:
checking correct functioning of SBML... no:
                   CFLAGS=3D-g -O2 -I/usr/local/include =
-I/usr/local/include/sbml
                   LDFLAGS=3D -Wl,-rpath,/usr/local/lib -L/usr/local/lib
                   LIBS=3D-lexpat -lxerces-c -lsbml
configure: error: Can not link to SBML Library:
                  Please, make sure to use libSBML version >=3D 2.3.2

Is it mandatory to have libSBML installed with xerces or there is a way =
to keep on using expat?

Thanks for your time,=20




Adri=E1n.