[SOSlib-discuss] new topological sorting in CVS

[Rainer M. <ra...@tb...>]

Hi,

FYI, the new topological sorting is now in CVS now.

All programs in the example folder work as before (batch_integrate.c has 
some internal bugs), including sensitivity and adjoint solver examples.

The SBML semantic test suite also works fine, including some tests which 
failed so far for the commandline compilation (related to a bug in 
piecewise expressions).

Also, I have started to document the functionality of the library at
http://www.tbi.univie.ac.at/wiki/index.php/SOSlib
which shows which sosLib functionality is supposed to work with which 
SBML feature.

next steps before release:
* implementation of the internal arithmetic compiler (whcih currently 
can be tested with 'make DEFS="-DARITHMETIC_COMPILER"').
* implement SBML constraints
* option for higher internal resolution (optionally integrate several 
steps within IntegratorInstance_integrateOneStep) for an improved 
handling of SBML events

Thanks,
Rainer