[SOSlib-devel] todo for next release

[Rainer M. <ra...@tb...>]

Hi Friends,

here a rough todo list for the next release ... at least some of the 
stuff below should be done before the next release. If you have 
preferences/opions or want to add things feel free:

Functionality:
General:
* odeSolverBatch (use Eryk's code)
* assignment rule ordering (also consider DAE systems/IDA solver extension)
* variable compartments, ODEs in amounts
* online compilation
* exact event detection
-> Rainer and Xtof

Text-based input files for:
** reaction network: Vienna Reaction library
** ODE system: xppaut format
-> Xtof

Sens. Analysis output:
* Direct Lyapunov Exponent analysis
* Fisher Information Matrix
-> James and Stefan :-) ???

Dependencies:
* libSBML 3
* Sundials 2.3.0
-> Rainer and Xtof

Pending:
* Test suite ??
** Functionality
** Performance

Configure:
* malloc.h
* -R/-rpath switch
* general refactoring!!
-> Rainer and Xtof