Re: [SOSlib-devel] Compilation errors on Kubuntu linux.[Scanned]

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Folks

Ideally the configure scripts should work this out - but I'm not
volunteering :-)

yours

Andrew=20

> -----Original Message-----
> From: sbm...@li...=20
> [mailto:sbm...@li...] On=20
> Behalf Of Rainer Machne
> Sent: 17 July 2006 10:43
> To: W Eryk Wolski
> Cc: sbm...@li...
> Subject: Re: [SOSlib-devel] Compilation errors on Kubuntu=20
> linux.[Scanned]
>=20
> Hi Eryk,
>=20
> acosh, asinh and atanh are defined in tgmath.h, which=20
> provides some additional functions to the ones in math.
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> However, it wasn't availalbe on some platforms so Andrew (i=20
> think) included these functions within WIN32 tags but i=20
> removed those tags because of a general ISO C90=20
> incompatibility of tgmath.h (and SOSlib wants to be ISO C90).
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> Maybe your math.h includes the tgmath.h ?
> I think that was the reason why it initally worked here on=20
> our machines without either those local declarations or=20
> including tgmath.h
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> Anyways, you can try to remove the static function=20
> definitions for acsoh, asinh and atanh from your local copy=20
> of processAST.c and rely on your local definitions (should be=20
> OK!) or check whether the math.h on your system includes=20
> tgmath.h and use another version of math.h
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> I am not so familiar with all that ISO C stuff. So maybe=20
> someone else can give a more detailed answer.
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> Maybe we need to add some tags like
> #ifdef acosh
> etc. around these function declarations?
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> Rainer
>=20
>=20
>=20
>=20
>=20
>=20
> On Thu, 13 Jul 2006, W Eryk Wolski wrote:
>=20
> > Dear all,
> >
> > Getting compilation errors on Kubuntu 6.0.6 with gcc 4.0.3
> >
> >
> >
> >        then mv -f ".deps/odeConstruct.Tpo" ".deps/odeConstruct.Po";=20
> > else rm -f ".deps/odeConstruct.Tpo"; exit 1; fi if gcc=20
> -DHAVE_CONFIG_H=20
> > -I. -I. -I../src/sbmlsolver -I/home/witek/opt/sundials/include
> > -I/home/witek/opt/libsbml2.3.4/include
> > -I/home/witek/opt/libsbml2.3.4/include/sbml
> > -I/home/witek/opt/libsbml2.3.4/include
> > -I/home/witek/opt/libsbml2.3.4/include/sbml/sbml -I.     -MT
> > odeModel.o -MD -MP -MF ".deps/odeModel.Tpo" -c -o odeModel.o=20
> > odeModel.c; \
> >        then mv -f ".deps/odeModel.Tpo" ".deps/odeModel.Po";=20
> else rm -f=20
> > ".deps/odeModel.Tpo"; exit 1; fi
> > odeModel.c: In function 'ODEModel_computeAssignmentRuleSets':
> > odeModel.c:417: warning: passing argument 1 of 'ASTNode_getSymbols'
> > discards qualifiers from pointer target type
> > odeModel.c:424: warning: passing argument 1 of 'ASTNode_getSymbols'
> > discards qualifiers from pointer target type
> > odeModel.c:426: warning: passing argument 2 of 'List_add' discards=20
> > qualifiers from pointer target type
> > odeModel.c: In function 'ODEModel_createFromFileWithObservables':
> > odeModel.c:744: warning: passing argument 1 of 'parseModel'=20
> discards=20
> > qualifiers from pointer target type if gcc -DHAVE_CONFIG_H -I. -I.=20
> > -I../src/sbmlsolver -I/home/witek/opt/sundials/include
> > -I/home/witek/opt/libsbml2.3.4/include
> > -I/home/witek/opt/libsbml2.3.4/include/sbml
> > -I/home/witek/opt/libsbml2.3.4/include
> > -I/home/witek/opt/libsbml2.3.4/include/sbml/sbml -I.     -MT
> > odeSolver.o -MD -MP -MF ".deps/odeSolver.Tpo" -c -o odeSolver.o=20
> > odeSolver.c; \
> >        then mv -f ".deps/odeSolver.Tpo"=20
> ".deps/odeSolver.Po"; else rm=20
> > -f ".deps/odeSolver.Tpo"; exit 1; fi if gcc -DHAVE_CONFIG_H -I. -I.=20
> > -I../src/sbmlsolver -I/home/witek/opt/sundials/include
> > -I/home/witek/opt/libsbml2.3.4/include
> > -I/home/witek/opt/libsbml2.3.4/include/sbml
> > -I/home/witek/opt/libsbml2.3.4/include
> > -I/home/witek/opt/libsbml2.3.4/include/sbml/sbml -I.     -MT
> > processAST.o -MD -MP -MF ".deps/processAST.Tpo" -c -o processAST.o=20
> > processAST.c; \
> >        then mv -f ".deps/processAST.Tpo"=20
> ".deps/processAST.Po"; else=20
> > rm -f ".deps/processAST.Tpo"; exit 1; fi
> > processAST.c:69: error: static declaration of 'acosh' follows=20
> > non-static declaration
> > processAST.c:74: error: static declaration of 'asinh' follows=20
> > non-static declaration
> > processAST.c:79: error: static declaration of 'atanh' follows=20
> > non-static declaration
> > make[1]: *** [processAST.o] Error 1
> > make[1]: Leaving directory
> > `/home/witek/devel/cpp/odesolver/sos3/SBML_odeSolver/src'
> > make: *** [all-recursive] Error 1
> >
> >
> > Any suggestions
> >
> > Eryk
> >
> >
> >=20
> ----------------------------------------------------------------------
> > --- Using Tomcat but need to do more? Need to support web services,=20
> > security?
> > Get stuff done quickly with pre-integrated technology to=20
> make your job=20
> > easier Download IBM WebSphere Application Server v.1.0.1 based on=20
> > Apache Geronimo
> >=20
> =
http://sel.as-us.falkag.net/sel?cmd=3Dlnk&kid=3D120709&bid=3D263057&dat=3D=
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> > 42 _______________________________________________
> > sbmlsolver-devel mailing list
> > sbm...@li...
> > https://lists.sourceforge.net/lists/listinfo/sbmlsolver-devel
> >
>=20
>=20
> --------------------------------------------------------------
> -----------
> Using Tomcat but need to do more? Need to support web=20
> services, security?
> Get stuff done quickly with pre-integrated technology to make=20
> your job easier Download IBM WebSphere Application Server=20
> v.1.0.1 based on Apache Geronimo
> http://sel.as-us.falkag.net/sel?cmd=3Dlnk&kid=3D120709&bid=3D263057&
> dat=3D121642
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