From: Petr D. <pd...@sa...> - 2011-04-08 18:25:52
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Hi, the perl script and API from the VCFtools package support VCFv4.1 Best, Petr On Thu, 2011-04-07 at 15:36 -0500, Cliff Yiu wrote: > Hi, > > I used samtools mpileup and bcftools to get variant vcf files and > noticed the vcf format is 4.1. I then tried vcftools to analyze the > data but got the following error message: > > > VCFtools - v0.1.3 > (C) Adam Auton 2009 > > Error:VCF version must be v4.0: > You are using version VCFv4.1 > > Is there any tool that I can use for vcf4.1? > > Thanks > > -C > > > ------------------------------------------------------------------------------ > Xperia(TM) PLAY > It's a major breakthrough. An authentic gaming > smartphone on the nation's most reliable network. > And it wants your games. > http://p.sf.net/sfu/verizon-sfdev > _______________________________________________ Samtools-help mailing list Sam...@li... https://lists.sourceforge.net/lists/listinfo/samtools-help -- The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE. |