ReferenceAnnotationDownload

RseqFlow required annotation files:

• Human-Homo Sapiens
• Mouse-Mus musculus
• Rhesus-Macaca Mulatta
• c.elegans
• Fruitfly-drosophila melanogaster
• yeast-S.cerevisiae

Human-Homo Sapiens

• Genome Annotation File (GTF format) (GencodeV14)
• Transcriptome reference sequences (GencodeV14)
• Genome reference sequences (Ensembl V69 GRch37/Hg19)
• Mitochondria reference sequence
• Ribosomal RNA reference sequences

Mouse-Mus musculus

• Genome Annotation File (GTF format) from RefSeq
• Reference Transcriptome Sequences from RefSeq
• Genome Annotation File (GTF format) from Ensembl
• Reference Transcriptome Sequences from Ensembl
• Genome Sequence(GRCm38/mm10)

Rhesus-Macaca Mulatta

• Genome Annotation File (GTF format) from RefSeq
• Reference Transcriptome Sequences from RefSeq
• Genome Sequence(MGSC Merged/rheMac2)

c.elegans

• Genome Annotation File (GTF format) from RefSeq
• Reference Transcriptome Sequences from RefSeq
• Genome Sequence(WS220/ce10)

Fruitfly-drosophila melanogaster

• Genome Annotation File (GTF format) from RefSeq
• Reference Transcriptome Sequences from RefSeq
• Genome Annotation File (GTF format) from Ensembl
• Reference Transcriptome Sequences from Ensembl
• Genome Sequence(BDGP R5/dm3)

yeast-S.cerevisiae

• Genome Annotation File (GTF format) from SGD
• Reference Transcriptome Sequences from SGD
• Genome Annotation File (GTF format) from Ensembl
• Reference Transcriptome Sequences from Ensembl
• Genome Sequence(sacCer3)