https://sourceforge.net/p/rop2/wiki/Targeted%2520ROP%2520analysis/Recent changes to Targeted ROP analysisenSun, 26 Jun 2016 07:26:29 -0000https://sourceforge.net/p/rop2/wiki/Targeted%2520ROP%2520analysis/<div class="markdown_content"><pre>--- v1 +++ v2 @@ -1,11 +1,11 @@ In case you are only interested in a specific analyis (e.g. antibody profiling) you may use use the following options : -* `--repeat. Run lost repeat profiling ONLY +* `--repeat`. Run lost repeat profiling ONLY * `--immune`. Run antibody profiling ONLY * `--circRNA`. Run circular RNA profiling ONLY * `--microbiome`. Run microbime profiling ONLY To run antibody profiling for toy example use the following command: - :::python rop.py --immune example/unmappedExample.fastq example/test/ + python rop.py --immune example/unmappedExample.fastq example/test/ </pre> </div>Serghei MangulSun, 26 Jun 2016 07:26:29 -0000https://sourceforge.net7bf8b420eed6a77efa94ea8bac686a07741fff67https://sourceforge.net/p/rop2/wiki/Targeted%2520ROP%2520analysis/<div class="markdown_content"><p>In case you are only interested in a specific analyis (e.g. antibody profiling) you may use use the following options : </p> <ul> <li>`--repeat. Run lost repeat profiling ONLY</li> <li><code>--immune</code>. Run antibody profiling ONLY</li> <li><code>--circRNA</code>. Run circular RNA profiling ONLY</li> <li><code>--microbiome</code>. Run microbime profiling ONLY</li> </ul> <p>To run antibody profiling for toy example use the following command:</p> <div class="codehilite"><pre></pre></div> </div>Serghei MangulSun, 26 Jun 2016 07:26:29 -0000https://sourceforge.net3474d67aed5d804d4fc64c8bfc7bec2d64b065a5