#2 disk pathway not found

[Anonymous]

Java Plug-in 1.6.0_07
Using JRE version 1.6.0_07 Java HotSpot(TM) Client VM
User home directory = C:\Documents and Settings\cda18

----------------------------------------------------
c: clear console window
f: finalize objects on finalization queue
g: garbage collect
h: display this help message
l: dump classloader list
m: print memory usage
o: trigger logging
p: reload proxy configuration
q: hide console
r: reload policy configuration
s: dump system and deployment properties
t: dump thread list
v: dump thread stack
x: clear classloader cache
0-5: set trace level to <n>
----------------------------------------------------

C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:13:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:02 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:02 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:36 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:37 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:38 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:39 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:40 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:41 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:41 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:41 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:41 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:41 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:41 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:42 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:42 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:42 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:42 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:42 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:42 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:43 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:44 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:45 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:46 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:47 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:48 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:49 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:50 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:51 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:52 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:53 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:54 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:55 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:56 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:57 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:58 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:14:59 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:00 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:01 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:02 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:02 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:02 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:02 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:02 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:02 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:03 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:04 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:05 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:06 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:07 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:08 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:09 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:10 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:11 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:12 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:13 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:14 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:15 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:16 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:17 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:18 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:19 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:20 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:21 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:22 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:23 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:24 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:25 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:26 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:27 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:28 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:29 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:30 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:31 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:32 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:33 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Nov 14, 2008 11:15:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Nov 14, 2008 11:15:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Nov 14, 2008 11:15:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Nov 14, 2008 11:15:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Nov 14, 2008 11:15:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Nov 14, 2008 11:15:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Nov 14, 2008 11:15:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Nov 14, 2008 11:15:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Nov 14, 2008 11:15:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Nov 14, 2008 11:15:34 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....
C:\Program Files\Mozilla Firefox
Energy modifier listening....
Structure modifier listening....
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Unhandled exception:
java.io.FileNotFoundException: RnaDVLib\energy.jar (The system cannot find the path specified)
at java.util.zip.ZipFile.open(Native Method)
at java.util.zip.ZipFile.<init>(Unknown Source)
at java.util.zip.ZipFile.<init>(Unknown Source)
at rnadv.JarUpdate.extractZipFileAnother(JarUpdate.java:74)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:61)
at rnadv.InstallationFrame.run(InstallationFrame.java:113)
at java.lang.Thread.run(Unknown Source)
Downloading program library....BrowserLauncher.jar
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\BrowserLauncher.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:126)
at java.lang.Thread.run(Unknown Source)
Downloading program library....rnaml.jar
Cookie service is not available - use cache to determine "Cookie"
Cookie service is not available - use cache to determine "Cookie"
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\rnaml.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:127)
at java.lang.Thread.run(Unknown Source)
Downloading program library....commons-net-1.4.1.jar
Cookie service is not available - use cache to determine "Cookie"
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\commons-net-1.4.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:128)
at java.lang.Thread.run(Unknown Source)
Downloading program library....j2ee.jar
Cookie service is not available - use cache to determine "Cookie"
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\j2ee.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:129)
at java.lang.Thread.run(Unknown Source)
Downloading program library....nanoxml-2.1.1.jar
Cookie service is not available - use cache to determine "Cookie"
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: .\lib\nanoxml-2.1.1.jar (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadJarLibrary(JarUpdate.java:185)
at rnadv.InstallationFrame.run(InstallationFrame.java:130)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....DC0262.ct
Cookie service is not available - use cache to determine "Cookie"
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\DC0262.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:146)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....G.stearothermophilus_AJ251080.ct
Cookie service is not available - use cache to determine "Cookie"
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\G.stearothermophilus_AJ251080.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:147)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....H.marismortui.ct
Cookie service is not available - use cache to determine "Cookie"
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\H.marismortui.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:148)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PSTVd_RNA.ct
Cookie service is not available - use cache to determine "Cookie"
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PSTVd_RNA.ct (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:149)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00722.rnaml
Cookie service is not available - use cache to determine "Cookie"
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00722.rnaml (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:150)
at java.lang.Thread.run(Unknown Source)
Downloading sample file....PDB_00701.dp
Cookie service is not available - use cache to determine "Cookie"
Nov 14, 2008 11:15:35 AM rnadv.JarUpdate downloadJarFile
SEVERE: null
java.io.FileNotFoundException: RnaDVLib\ct\PDB_00701.dp (The system cannot find the path specified)
at java.io.FileOutputStream.open(Native Method)
at java.io.FileOutputStream.<init>(Unknown Source)
at java.io.FileOutputStream.<init>(Unknown Source)
at rnadv.JarUpdate.downloadJarFile(JarUpdate.java:257)
at rnadv.JarUpdate.executeRemote(JarUpdate.java:59)
at rnadv.JarUpdate.downloadCTSample(JarUpdate.java:168)
at rnadv.InstallationFrame.run(InstallationFrame.java:151)
at java.lang.Thread.run(Unknown Source)
RNA-DV reloading....