[Refdb-cvs] CVS: refdb/examples xnoteset.xml,1.2,1.3 testrefs.xml,1.3,1.4
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[Refdb-cvs] CVS: refdb/examples xnoteset.xml,1.2,1.3 testrefs.xml,1.3,1.4
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From: Markus H. <mho...@us...> - 2004-02-17 22:22:13
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Update of /cvsroot/refdb/refdb/examples In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv2526/examples Modified Files: xnoteset.xml testrefs.xml Log Message: updated to new DTD versions Index: xnoteset.xml =================================================================== RCS file: /cvsroot/refdb/refdb/examples/xnoteset.xml,v retrieving revision 1.2 retrieving revision 1.3 diff -u -U2 -r1.2 -r1.3 --- xnoteset.xml 30 Dec 2003 23:57:05 -0000 1.2 +++ xnoteset.xml 17 Feb 2004 22:13:07 -0000 1.3 @@ -7,26 +7,26 @@ <xnoteset> -<xnote id="1" date="2003-10-12"> - <title>myfirstnote</title> + <xnote id="1" date="2003-10-12"> + <title>myfirstnote</title> - <content>the note proper</content> - <keyword>biochemistry</keyword> - <keyword>enzymes</keyword> - <link type="reference" target="WANG2002"/> - <link type="reference" target="Phadke1994"/> - <link type="author" target="Walsh,N."/> - <link type="journalabbrev" target="Biochem.Pharmacol."/> -</xnote> + <content>the note proper</content> + <keyword>biochemistry</keyword> + <keyword>enzymes</keyword> + <link type="reference" target="WANG2002"/> + <link type="reference" target="Phadke1994"/> + <link type="author" target="Walsh,N."/> + <link type="journalabbrev" target="Biochem.Pharmacol."/> + </xnote> -<xnote id="2" key="secondnote"> - <title>mysecondnote</title> + <xnote id="2" key="secondnote"> + <title>mysecondnote</title> - <content type="application/xhtml+xml" xml:lang="en-us"><para id='2' style='bold'>the note proper</para></content> - <keyword>biochemistry</keyword> - <keyword>enzymes</keyword> - <link type="reference" target="Phadke1994"/> - <link type="author" target="Walsh,N."/> - <link type="journalabbrev" target="Biochem.Pharmacol."/> -</xnote> + <content type="application/xhtml+xml" xml:lang="en-us"><para id='2' style='bold'>the note proper</para></content> + <keyword>biochemistry</keyword> + <keyword>enzymes</keyword> + <link type="reference" target="Phadke1994"/> + <link type="author" target="Walsh,N."/> + <link type="journalabbrev" target="Biochem.Pharmacol."/> + </xnote> </xnoteset> Index: testrefs.xml =================================================================== RCS file: /cvsroot/refdb/refdb/examples/testrefs.xml,v retrieving revision 1.3 retrieving revision 1.4 diff -u -U2 -r1.3 -r1.4 --- testrefs.xml 25 Jan 2004 13:15:11 -0000 1.3 +++ testrefs.xml 17 Feb 2004 22:13:07 -0000 1.4 @@ -1,230 +1,258 @@ -<?xml version="1.0"? encoding="UTF-8"> +<?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE ris PUBLIC "-//Markus Hoenicka//DTD Ris V1.0.2//EN" "http://refdb.sourceforge.net/dtd/risx/risx-1.02/risx.dtd"> <ris> -<entry type="BOOK" id="31" citekey="MILLER1999"> -<publication> -<title>My first book about dinosaurs</title> -<author> -<lastname>Miller</lastname> -<firstname>A</firstname> -</author> -<author> -<lastname>Myers</lastname> -<firstname>B</firstname> -<middlename>B</middlename> -<suffix>Jr.</suffix> -</author> -<pubinfo> -<pubdate type="primary"> -<date> -<year>1999</year> -</date> -</pubdate> -<city>Sebastopol</city> -<publisher>O'Reilly</publisher> -<serial>1-56592-580-7</serial> -<address>mi...@di...</address> -<url>http://www.dinosaurs.upenn.edu/</url> -</pubinfo> -</publication> -<set> -<title>My first book series</title> -<author> -<lastname>Smith</lastname> -<firstname>K</firstname> -</author> -</set> -<libinfo user="markus"> -<notes>Not bad, after all</notes> -<reprint status="ONREQUEST"> -<date> -<year>2002</year> -<month>2</month> -<day>24</day> -</date> -</reprint> -<availability type="useroot">palaeontology/dinosaurs/millera2002.pdf</availability> -</libinfo> -<contents> -<abstract>Dinosaurs were big animals that ate a lot</abstract> -<keyword>dinosaurs</keyword> -<keyword>evolution</keyword> -<keyword>animals</keyword> -</contents> -</entry> -<entry type="CHAP" id="32" citekey="WALSH1999"> -<part> -<title>XML: Principles, Tools, and Techniques</title> -<author> -<lastname>Walsh</lastname> -<firstname>N</firstname> -</author> -</part> -<publication> -<title>Guide to XML</title> -<author> -<lastname>Connolly</lastname> -<firstname>D</firstname> -</author> -<pubinfo> -<pubdate type="primary"> -<date> -<year>1999</year> -</date> -</pubdate> -<city>Sebastopol</city> -<publisher>O'Reilly</publisher> -</pubinfo> -</publication> -<libinfo user="markus"><notes>Not bad</notes> -<reprint status="NOTINFILE"/></libinfo> -<contents><abstract>An introduction how to deal with XML</abstract> -<keyword>XML</keyword> -<keyword>computer</keyword> -<keyword>markup languages</keyword> -</contents> -</entry> -<entry type="CONF" id="33" citekey="PHADKE1994"><part><title>Application of global positioning systems to electrical systems synchronized phasor measurements techniques and uses</title> -<author><lastname>Phadke</lastname> -<firstname>Arun</firstname> -<middlename>G</middlename> -</author> -</part> -<publication><title>Colloquium on Developments in the Use of Global Positioning Systems (GPS) in Power Systems,Feb 8 1994</title> -<pubinfo><pubdate type="primary"><date><year>1994</year> -<month>02</month> -<day>08</day> -</date> -</pubdate> -<issue>032</issue> -<startpage>4/1</startpage> -<endpage>4/2</endpage> -<city>London,USA</city> -<publisher>IEE,Stevenage,Engl</publisher> -<serial>0963-3308</serial> -<address>Virginia Tech, Blacksburg, VA, USA</address> -</pubinfo> -</publication> -<set><title>IEE Colloquium (Digest)</title> -</set> -<libinfo user="markus"><reprint status="NOTINFILE"/></libinfo> -<contents><abstract>GPS navigational satellites provide an ideal method for distributing a common timing pulse at any point in the power network. Receivers of GPS transmission can reproduce the 1 pulse-per-second at any location on earth with better than 1 &mu;sec accuracy. Thus, if GPS receivers are built into each measuring system, phasors measured by these systems could be used as simultaneous measurements from all points of the power system, offering far more accuracy than needed for performing engineering analysis functions.</abstract> -<keyword>Global positioning system</keyword> -<keyword>Electric power systems</keyword> -<keyword>Digital computers</keyword> -<keyword>Electric current measurement</keyword> -<keyword>Voltage measurement</keyword> -<keyword>Communication satellites</keyword> -<keyword>Satellite relay systems</keyword> -<keyword>Iterative methods</keyword> -<keyword>Algorithms</keyword> -<keyword>Units of measurement</keyword> -</contents> -</entry> -<entry type="STAT" id="34" citekey="ANONYMOUS0"><publication><title>The Anti-Riot Act</title> -<pubinfo><pubdate type="primary"><date><year>1968</year> -</date> -</pubdate> -<pubdate type="secondary"><date></date> -</pubdate> -<volume>Code Number: 18 U.S.C.</volume> -<issue>Public Law Number: P.L. 90-284</issue> -<startpage>Sections 2101, 2102</startpage> -</pubinfo> -</publication> -<libinfo user="markus"><reprint status="NOTINFILE"/></libinfo> -<contents></contents> -</entry> -<entry type="JOUR" id="35" citekey="WANG2002"><part><title>Inhibition of superoxide anion generation by YC-1 in rat neutrophils through cyclic GMP-dependent and -independent mechanisms</title> -<author><lastname>Wang</lastname> -<firstname>J</firstname> -<middlename>P</middlename> -</author> -<author><lastname>Chang</lastname> -<firstname>L</firstname> -<middlename>C</middlename> -</author> -<author><lastname>Raung</lastname> -<firstname>S</firstname> -<middlename>L</middlename> -</author> -<author><lastname>Hsu</lastname> -<firstname>M</firstname> -<middlename>F</middlename> -</author> -<author><lastname>Huang</lastname> -<firstname>L</firstname> -<middlename>J</middlename> -</author> -<author><lastname>Kuo</lastname> -<firstname>S</firstname> -<middlename>C</middlename> -</author> -</part> -<publication><title type="abbrev">Biochem.Pharmacol.</title> -<pubinfo> -<pubdate type="primary"> -<date> -<year>2002</year> -</date> -<otherinfo>Feb 15</otherinfo> -</pubdate> -<volume>63</volume> -<issue>4</issue> -<startpage>577</startpage> -<endpage>85</endpage> -<address>Department of Education and Research, Taichung Veterans General Hospital, 160 Chung Kang Road, Sec. 3, 407, ROC, Taichung, Taiwan. w1...@vg...</address> -</pubinfo> -</publication> -<libinfo user="markus"><reprint status="NOTINFILE"/></libinfo> -<contents><abstract>3-(5'-Hydroxymethyl-2'-furyl)-1-benzyl indazole (YC-1), a soluble guanylyl cyclase (sGC) activator, inhibited formyl-methionyl-leucyl-phenylalanine (fMLP)-induced superoxide anion (O(2)*(-)) generation and O(2) consumption in rat neutrophils (IC(50) values of 12.7+/-3.1 and 17.7+/-6.9 microM, respectively). Inhibition of O(2)*(-) generation by YC-1 was partially reversed by the cyclic GMP-lowering agent 6-anilinoquinoline-5,8-quinone (LY83583) and by the Rp isomer of 8-(4-chlorophenylthio)guanosine-3',5'-monophosphorothioate (Rp-8-pCPT-cGMPS), a cyclic GMP-dependent protein kinase inhibitor. In cell-free systems, YC-1 failed to alter O(2)*(-) generation during dihydroxyfumaric acid autoxidation, phorbol 12-myristate 13-acetate (PMA)-activated neutrophil particulate NADPH oxidase preparation, and arachidonic acid-induced NADPH oxidase activation. YC-1 increased cellular cyclic GMP levels through the activation of sGC and the inhibition of cyclic GMP-hydrolyzing phosphodiesterase activity. The plateau phase, but not the initial spike, of fMLP-induced [Ca(2+)](i) changes was inhibited by YC-1 (IC(50) about 15 microM). fMLP- but not PMA-induced phospholipase D activation was inhibited by YC-1 (IC(50) about 28 microM). Membrane-associated ADP-ribosylation factor and Rho A in cell activation was also reduced by YC-1 at a similar concentration range. Neither cytosolic protein kinase C (PKC) activity nor PKC membrane translocation was altered by YC-1. YC-1 did not affect either fMLP-induced phosphatidylinositol 3-kinase activation or p38 mitogen-activated protein kinase phosphorylation, but slightly attenuated the phosphorylation of extracellular signal-regulated kinase. Collectively, these results indicate that the inhibition of the fMLP-induced respiratory burst by YC-1 is mediated by cyclic GMP-dependent and -independent signaling mechanisms.</abstract> -<keyword>translocation</keyword> -</contents> -</entry> -<entry type="CONF" id="36" citekey="JACKQUET1995B"><part><title>Radiation induced translocations</title> -<author><lastname>Jackquet</lastname> -</author> -<author><lastname>De Saint Georges</lastname> -<firstname>J</firstname> -<middlename>M</middlename> -</author> -<author><lastname>Couwberghs</lastname> -<firstname>T</firstname> -</author> -<author><lastname>Melis</lastname> -<firstname>H</firstname> -</author> -<author><lastname>Joris</lastname> -<firstname>J</firstname> -</author> -<author><lastname>Machiels</lastname> -<firstname>W</firstname> -</author> -<author><lastname>Bens</lastname> -<firstname>M</firstname> -</author> -</part> -<publication><pubinfo><pubdate type="primary"><date><year>2003</year> -</date> -</pubdate> -<pubdate type="secondary"><date><year>1995</year> -</date> -<otherinfo>August 27 - September 1</otherinfo> -</pubdate> -<volume>2</volume> -<startpage>2275</startpage> -<endpage>81</endpage> -<city>New York</city> -<publisher>Uitgeverij de standaard</publisher> -</pubinfo> -</publication> -<set><title>10th Intern Congress of Radiation Research</title> -</set> -<libinfo user="markus"><reprint status="INFILE"/></libinfo> -<contents><abstract>blablablalablalbl balalblaalb baalhalbllaalalbalalbalbal</abstract> -<keyword>conf</keyword> -<keyword>radiation</keyword> -<keyword>translocation</keyword> -</contents> -</entry> + <entry type="BOOK" id="31" citekey="MILLER1999"> + <publication> + <title>My first book about dinosaurs</title> + <author> + <lastname>Miller</lastname> + <firstname>A</firstname> + </author> + <author> + <lastname>Myers</lastname> + <firstname>B</firstname> + <middlename>B</middlename> + <suffix>Jr.</suffix> + </author> + <pubinfo> + <pubdate type="primary"> + <date> + <year>1999</year> + </date> + </pubdate> + <city>Sebastopol</city> + <publisher>O'Reilly</publisher> + <serial>1-56592-580-7</serial> + <address>mi...@di...</address> + <url>http://www.dinosaurs.upenn.edu/</url> + </pubinfo> + </publication> + <set> + <title>My first book series</title> + <author> + <lastname>Smith</lastname> + <firstname>K</firstname> + </author> + </set> + <libinfo user="markus"> + <notes>Not bad, after all</notes> + <reprint status="ONREQUEST"> + <date> + <year>2002</year> + <month>2</month> + <day>24</day> + </date> + </reprint> + <availability type="useroot">palaeontology/dinosaurs/millera2002.pdf</availability> + </libinfo> + <contents> + <abstract>Dinosaurs were big animals that ate a lot</abstract> + <keyword>dinosaurs</keyword> + <keyword>evolution</keyword> + <keyword>animals</keyword> + </contents> + </entry> + <entry type="CHAP" id="32" citekey="WALSH1999"> + <part> + <title>XML: Principles, Tools, and Techniques</title> + <author> + <lastname>Walsh</lastname> + <firstname>N</firstname> + </author> + </part> + <publication> + <title>Guide to XML</title> + <author> + <lastname>Connolly</lastname> + <firstname>D</firstname> + </author> + <pubinfo> + <pubdate type="primary"> + <date> + <year>1999</year> + </date> + </pubdate> + <city>Sebastopol</city> + <publisher>O'Reilly</publisher> + </pubinfo> + </publication> + <libinfo user="markus"><notes>Not bad</notes> + <reprint status="NOTINFILE"/></libinfo> + <contents><abstract>An introduction how to deal with XML</abstract> + <keyword>XML</keyword> + <keyword>computer</keyword> + <keyword>markup languages</keyword> + </contents> + </entry> + <entry type="CONF" id="33" citekey="PHADKE1994"><part><title>Application of global positioning systems to electrical systems synchronized phasor measurements techniques and uses</title> + <author><lastname>Phadke</lastname> + <firstname>Arun</firstname> + <middlename>G</middlename> + </author> + </part> + <publication><title>Colloquium on Developments in the Use of Global Positioning Systems (GPS) in Power Systems,Feb 8 1994</title> + <pubinfo><pubdate type="primary"><date><year>1994</year> + <month>02</month> + <day>08</day> + </date> + </pubdate> + <issue>032</issue> + <startpage>4/1</startpage> + <endpage>4/2</endpage> + <city>London,USA</city> + <publisher>IEE,Stevenage,Engl</publisher> + <serial>0963-3308</serial> + <address>Virginia Tech, Blacksburg, VA, USA</address> + </pubinfo> + </publication> + <set><title>IEE Colloquium (Digest)</title> + </set> + <libinfo user="markus"><reprint status="NOTINFILE"/></libinfo> + <contents><abstract>GPS navigational satellites provide an ideal method for distributing a common timing pulse at any point in the power network. Receivers of GPS transmission can reproduce the 1 pulse-per-second at any location on earth with better than 1 &mu;sec accuracy. Thus, if GPS receivers are built into each measuring system, phasors measured by these systems could be used as simultaneous measurements from all points of the power system, offering far more accuracy than needed for performing engineering analysis functions.</abstract> + <keyword>Global positioning system</keyword> + <keyword>Electric power systems</keyword> + <keyword>Digital computers</keyword> + <keyword>Electric current measurement</keyword> + <keyword>Voltage measurement</keyword> + <keyword>Communication satellites</keyword> + <keyword>Satellite relay systems</keyword> + <keyword>Iterative methods</keyword> + <keyword>Algorithms</keyword> + <keyword>Units of measurement</keyword> + </contents> + </entry> + <entry type="STAT" id="34" citekey="ANONYMOUS0"><publication><title>The Anti-Riot Act</title> + <pubinfo><pubdate type="primary"><date><year>1968</year> + </date> + </pubdate> + <pubdate type="secondary"><date></date> + </pubdate> + <volume>Code Number: 18 U.S.C.</volume> + <issue>Public Law Number: P.L. 90-284</issue> + <startpage>Sections 2101, 2102</startpage> + </pubinfo> + </publication> + <libinfo user="markus"><reprint status="NOTINFILE"/></libinfo> + <contents></contents> + </entry> + <entry type="JOUR" id="35" citekey="WANG2002"><part><title>Inhibition of superoxide anion generation by YC-1 in rat neutrophils through cyclic GMP-dependent and -independent mechanisms</title> + <author><lastname>Wang</lastname> + <firstname>J</firstname> + <middlename>P</middlename> + </author> + <author><lastname>Chang</lastname> + <firstname>L</firstname> + <middlename>C</middlename> + </author> + <author><lastname>Raung</lastname> + <firstname>S</firstname> + <middlename>L</middlename> + </author> + <author><lastname>Hsu</lastname> + <firstname>M</firstname> + <middlename>F</middlename> + </author> + <author><lastname>Huang</lastname> + <firstname>L</firstname> + <middlename>J</middlename> + </author> + <author><lastname>Kuo</lastname> + <firstname>S</firstname> + <middlename>C</middlename> + </author> + </part> + <publication><title type="abbrev">Biochem.Pharmacol.</title> + <pubinfo> + <pubdate type="primary"> + <date> + <year>2002</year> + </date> + <otherinfo>Feb 15</otherinfo> + </pubdate> + <volume>63</volume> + <issue>4</issue> + <startpage>577</startpage> + <endpage>85</endpage> + <address>Department of Education and Research, Taichung Veterans General Hospital, 160 Chung Kang Road, Sec. 3, 407, ROC, Taichung, Taiwan. w1...@vg...</address> + </pubinfo> + </publication> + <libinfo user="markus"><reprint status="NOTINFILE"/></libinfo> + <contents><abstract>3-(5'-Hydroxymethyl-2'-furyl)-1-benzyl indazole (YC-1), a soluble guanylyl cyclase (sGC) activator, inhibited formyl-methionyl-leucyl-phenylalanine (fMLP)-induced superoxide anion (O(2)*(-)) generation and O(2) consumption in rat neutrophils (IC(50) values of 12.7+/-3.1 and 17.7+/-6.9 microM, respectively). Inhibition of O(2)*(-) generation by YC-1 was partially reversed by the cyclic GMP-lowering agent 6-anilinoquinoline-5,8-quinone (LY83583) and by the Rp isomer of 8-(4-chlorophenylthio)guanosine-3',5'-monophosphorothioate (Rp-8-pCPT-cGMPS), a cyclic GMP-dependent protein kinase inhibitor. In cell-free systems, YC-1 failed to alter O(2)*(-) generation during dihydroxyfumaric acid autoxidation, phorbol 12-myristate 13-acetate (PMA)-activated neutrophil particulate NADPH oxidase preparation, and arachidonic acid-induced NADPH oxidase activation. YC-1 increased cellular cyclic GMP levels through the activation of sGC and the inhibition of cyclic GMP-hydrolyzing phosphodiesterase activity. The plateau phase, but not the initial spike, of fMLP-induced [Ca(2+)](i) changes was inhibited by YC-1 (IC(50) about 15 microM). fMLP- but not PMA-induced phospholipase D activation was inhibited by YC-1 (IC(50) about 28 microM). Membrane-associated ADP-ribosylation factor and Rho A in cell activation was also reduced by YC-1 at a similar concentration range. Neither cytosolic protein kinase C (PKC) activity nor PKC membrane translocation was altered by YC-1. YC-1 did not affect either fMLP-induced phosphatidylinositol 3-kinase activation or p38 mitogen-activated protein kinase phosphorylation, but slightly attenuated the phosphorylation of extracellular signal-regulated kinase. Collectively, these results indicate that the inhibition of the fMLP-induced respiratory burst by YC-1 is mediated by cyclic GMP-dependent and -independent signaling mechanisms.</abstract> + <keyword>translocation</keyword> + </contents> + </entry> + <entry type="CONF" id="36" citekey="JACKQUET1995B"><part><title>Radiation induced translocations</title> + <author><lastname>Jackquet</lastname> + </author> + <author><lastname>De Saint Georges</lastname> + <firstname>J</firstname> + <middlename>M</middlename> + </author> + <author><lastname>Couwberghs</lastname> + <firstname>T</firstname> + </author> + <author><lastname>Melis</lastname> + <firstname>H</firstname> + </author> + <author><lastname>Joris</lastname> + <firstname>J</firstname> + </author> + <author><lastname>Machiels</lastname> + <firstname>W</firstname> + </author> + <author><lastname>Bens</lastname> + <firstname>M</firstname> + </author> + </part> + <publication><pubinfo><pubdate type="primary"><date><year>2003</year> + </date> + </pubdate> + <pubdate type="secondary"><date><year>1995</year> + </date> + <otherinfo>August 27 - September 1</otherinfo> + </pubdate> + <volume>2</volume> + <startpage>2275</startpage> + <endpage>81</endpage> + <city>New York</city> + <publisher>Uitgeverij de standaard</publisher> + </pubinfo> + </publication> + <set><title>10th Intern Congress of Radiation Research</title> + </set> + <libinfo user="markus"><reprint status="INFILE"/></libinfo> + <contents><abstract>blablablalablalbl balalblaalb baalhalbllaalalbalalbalbal</abstract> + <keyword>conf</keyword> + <keyword>radiation</keyword> + <keyword>translocation</keyword> + </contents> + </entry> + <entry type="BOOK" id="37" citekey="smith1975metalloporphyrins"> + <publication> + <title>Porphyrins and metalloporphyrins</title> + <author> + <lastname>Smith</lastname> + <firstname>K</firstname> + <middlename>M</middlename> + </author> + <pubinfo> + <pubdate> + <date> + <year>1975</year> + </date> + </pubdate> + <city>Amsterdam</city> + <publisher>Elsevier Scientific Publishing Company</publisher> + </pubinfo> + </publication> + <libinfo user="markus"> + <reprint status="NOTINFILE" /> + </libinfo> + <contents> + <keyword>Porphyrins</keyword> + <keyword>Metalloporphyrins</keyword> + <keyword>Spectrophotometry [methods]</keyword> + <keyword>spectroscopy</keyword> + </contents> + </entry> </ris> |
