Fixing indentation.
Adds trackers to individual project XML (#5342).
Adds issue relations to individual issue XML (#5305).
Merged r3727 from trunk for 0.9.4 release.
Updates for 0.9.4 release.
Merged r3725 from trunk.
Adds auto scroll to context submenus (#2863).
Fixes strange random test failures with Mysql.
Fixes Bazaar adapter for JRuby/Win32 (#5404).
Fixes Mercurial adapter for JRuby (#4494, #5404).