From: Francois B. <ml...@li...> - 2023-05-18 08:21:30
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Dear list, I asked this question in rdkit's github discussions: https://github.com/rdkit/rdkit/discussions/6377 But, apparently that's not more responsive than the ML, so here is my question: --- I have a ligand, I would like to score its current conformer using rdkit's UFF implementation. Later, I would like to change some rotatable bond (single bond out of ring) and update the conformer's energy bu just re-evaluating the part of the energy that is supposed to have changed (i.e. the dihedral component). Bond lengths, bond angles and partial charges being constant. I suspect it should be faster than rescoring the conformer from scratch. How to do this with rdkit? --- Thanks a lot, Francois. |