Re: [Rdkit-discuss] ModuleNotFoundError: No module named 'rdkit'
Open-Source Cheminformatics and Machine Learning
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glandrum
From: Greg L. <gre...@gm...> - 2021-04-14 15:07:14
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That looks good. Please send the output of: ipython -c 'import IPython;import rdkit;print(IPython.__file__,rdkit.__file__)' and we also need to figure out exactly which version of ipython you are running. If you are running these commands in the command shell, that's where ipython in powershell: gcm ipython if you're using a bash shell: which ipython Please run the ipython -c and which/where/gcm command directly after each other and paste in both the command you executed and its output. -greg On Wed, Apr 14, 2021 at 4:46 PM Andrés Sánchez Ruiz < and...@gm...> wrote: > Dear Greg, > > This is what I see after activating my enviroment (foodpains) and > introducing your command: > > C:\Anaconda\envs\foodpains\lib\site-packages\IPython\__init__.py > C:\Anaconda\envs\foodpains\lib\site-packages\rdkit\__init__.py > > Best regards, > > Andrés > > El mié, 14 abr 2021 a las 15:42, Greg Landrum > (<gre...@gm...>) escribió: > > > > What do you see when you execute this quick test to ensure that ipython > and the rdkit are both really installed? > > > > python -c 'import IPython;import > rdkit;print(IPython.__file__,rdkit.__file__)' > > > > -greg > > > > On Wed, Apr 14, 2021 at 2:58 PM Andrés Sánchez Ruiz < > and...@gm...> wrote: > >> > >> Hello, > >> > >> I have not been able to solve the issue yet after installing ipython > >> in the same enviroment in which I have RDKIT. > >> > >> ipython 7.22.0 py39hd4e2768_0 > >> ipython_genutils 0.2.0 pyhd3eb1b0_1 > >> . > >> . > >> . > >> rdkit 2021.03.1 py39hfadf033_0 conda-forge > >> > >> From this enviroment I can call pandas (for example) but not RDKIT. > >> What is still not working? > >> > >> Best regards, > >> > >> Andrés > >> > >> > >> _______________________________________________ > >> Rdkit-discuss mailing list > >> Rdk...@li... > >> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss > |