[Rdkit-devel] Two 'Labute' descriptors seem to be always returning 0.0
Open-Source Cheminformatics and Machine Learning
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From: jeff g. <jg...@gm...> - 2018-03-15 21:26:26
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Dear RDKit Developers , First and foremost thank you for your excellent offering of a singularly useful set of molecular descriptors! As one of the authors cited by Dr Labute ( http://www.chemcomp.com/journal/vsadesc.htm) , i've appreciated RDKit's implementation of the "Labute descriptor" set. So i've noticed that two particular descriptors in that set, specifically SlogP_VSA9 and SMR_VSA8, appear to always return a value of 0.0 no matter which of a substantial set of small molecules are tested via: from rdkit.Chem import Descriptors Descriptors.SlogP_VSA9(molecule) Descriptors.SMR_VSA8(molecule) All other descriptors i've tried seem to produce sensible results (with those same molecules) Of course it's always possible that it's something i've mis-coded. I'm attaching a simple python program which returns the anomalous descriptor values for me. Thank you very much for all your efforts! -- jeff godden |