Re: [Rdkit-devel] drawing amino acids

[Greg L. <gre...@gm...>]

Hi Igor,

Could it be that you didn't generate coordinates for the molecule?

BTW: rdMolDraw2D.PrepareMolForDrawing() is a useful function to know about.

-greg


On Thu, Sep 7, 2017 at 2:16 PM, Igor Filippov <igo...@gm...>
wrote:

> Dear Colleagues,
>
> I seem to remember there already was a discussion about this,
> but I cannot find the relevant email thread, nor recall what was the
> conclusion.
>
> When I try to draw the following molecule I am getting an image of a few
> pixels in size, quite
> unusable.
>
> NC(=O)C(N)CCCC[NH3+]
>
> Has anyone else seen this problem?
>
> Best regards,
> Igor
>
>
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