[Rdkit-discuss] Problem Installing RDKit

[Stephen P. M. <s.m...@sb...>]

I have installed Spyder3.2.1 in the current version of Miniconda3 on my 
Debian v-9.1.0 64 bit Linux platform.  Spyder is performing well, but I 
am having difficulty installing the RDKit.

I followed the directions in the RDKit_Docs_current.pdf"

How to install RDKit with Conda
Creating a new conda environment with the RDKit installed using these 
packages requires one single command similar
to the following::
$ conda create -c rdkit -n my-rdkit-env rdkit
Finally, the new environment must be activated, so that the 
corresponding python interpreter becomes available in the
same shell:
$ source activate my-rdkit-env

There were no warning or error messages during the installation, but 
when I attempt running a simple Python script:

#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Tue Aug 15 11:41:24 2017

@author: comp
"""

from __future__ import print_function
from rdkit import Chem

m = Chem.MolFromSmiles('Cc1ccccc1')
m

I get:

IPython 6.1.0 -- An enhanced Interactive Python.

runfile('/home/comp/Apps/Python/untitled0.py', 
wdir='/home/comp/Apps/Python')
Traceback (most recent call last):

   File "<ipython-input-1-3842c59475d8>", line 1, in <module>
     runfile('/home/comp/Apps/Python/untitled0.py', 
wdir='/home/comp/Apps/Python')

   File 
"/home/comp/Apps/miniconda3/lib/python3.6/site-packages/spyder/utils/site/sitecustomize.py", 
line 688, in runfile
     execfile(filename, namespace)

   File 
"/home/comp/Apps/miniconda3/lib/python3.6/site-packages/spyder/utils/site/sitecustomize.py", 
line 101, in execfile
     exec(compile(f.read(), filename, 'exec'), namespace)

   File "/home/comp/Apps/Python/untitled0.py", line 10, in <module>
     from rdkit import Chem

ModuleNotFoundError: No module named 'rdkit'

RDKit is installed in ~/miniconda3/envs/mr-rdkit-env

Unfortunately, I have no clue as to what the problem(s) may be, 
assistance will be much appreciated.

Thanks in advance.
-- 
Stephen P. Molnar, Ph.D.		Life is a fuzzy set
www.molecular-modeling.net		Stochastic and multivariate
(614)312-7528 (c)
Skype: smolnar1