Re: [Rdkit-discuss] Fwd: 2D drawing with atoms labeled by index

[Peter S. S. <sh...@gm...>]

Hi, Hongbin,

Thanks. Indeed. svg2.svg, when renamed to svg2.html, shows the correct
image in Chrome. svg.html shows garbage.

Still, it would be good to be able to create a real .svg file from RDKit.

Best,
-P.

On Tue, Oct 25, 2016 at 2:35 AM, 杨弘宾 <yan...@16...> wrote:

> Hi, Peter,
>     I don't know whether it can help you since I did not repeat your code.
> But it acturally works in my computer:
>         change the extended name from .svg into .html and open it via
> chrome.
>     It should be valid with svg2.svg (the namespace of svg were removed).
>
> ------------------------------
> Hongbin Yang
>
>
> *From:* Peter S. Shenkin <sh...@gm...>
> *Date:* 2016-10-25 13:27
> *To:* Dmitri Maziuk <dmi...@gm...>
> *CC:* RDKit Discuss <rdk...@li...>
> *Subject:* Re: [Rdkit-discuss] Fwd: 2D drawing with atoms labeled by index
> Hi,
>
> Dima wrote:
>>
>> Try saving the text (svg/svg2) to a file and opening it in chrome (if you
>> can actually open a file in chrome) or some other application.
>
>
> I actually did that, and in a second email I reported:
>
>>
>>    - Chrome thinks svg.svg is empty
>>
>>
>>    - When I load svg2.svg, Chrome complains, "This XML file does not
>>    appear to have any style information associated with it. The document tree
>>    is shown below...."
>>
>>  -P.
>
> On Tue, Oct 25, 2016 at 12:28 AM, Dmitri Maziuk <dmi...@gm...>
> wrote:
>
>> OK, my turn: that went out too soon.
>>
>> It seems to me that jypiter, ipython, or whatever, has no idea how render
>> MIME type image/svg+xml. It can display an "SVG" object, but the bit that
>> turned image/svg+xml into "SVG" does not understand XML namespaces (that's
>> been around since at least 2009).
>>
>> Try saving the text (svg/svg2) to a file and opening it in chrome (if you
>> can actually open a file in chrome) or some other application.
>>
>> Dima
>>
>>
>