Re: [Rdkit-devel] Compiling RDKit on CentOS 5.3 x64

[Adrian S. <am...@ca...>]

Thanks, that worked. Maybe you can add this to the WorkingBuild wiki page.

Here are the results from the benchmark on my machine (Intel i7 920 /
CentOS 5.3 x64 (on vmware with 2 cores and 2gb memory) / g++
4.1.2-44)) :

times:  1.3 || 0.8 || 0.4 || 1.9 || 2.1 || 0.0 || 5.9 || 6.0 || 0.4 ||
0.6 || 15.4 || 0.5 || 7.5

Adrian

On Fri, Oct 16, 2009 at 05:23, Greg Landrum <gre...@gm...> wrote:
> Hi Adrian,
>
> The problem below should be solvable by adding a compile flag.
> Please try adding:
> <toolset>gcc:<cflags>-DBOOST_PYTHON_NO_PY_SIGNATURES
> to $RDBASE/Code/Jamroot
>
> There's some information here:
> https://sourceforge.net/mailarchive/message.php?msg_name=60825b0f0901152045i20eff2p427119822d8c2518%40mail.gmail.com
>
> Best regards,
> -greg
>
> On Thu, Oct 15, 2009 at 8:39 PM, Adrian Schreyer <am...@ca...> wrote:
>> Hi Greg,
>>
>> I tried to compile RDKit on CentOS 5.3 64 bit but for one target I get
>> a cryptic error.  The bjam output is attached. Any suggestions?
>>
>> Adrian
>>
>> ----
>> gcc -v
>> Using built-in specs.
>> Target: x86_64-redhat-linux
>> Configured with: ../configure --prefix=/usr --mandir=/usr/share/man
>> --infodir=/usr/share/info --enable-shared --enable-threads=posix
>> --enable-checking=release --with-system-zlib --enable-__cxa_atexit
>> --disable-libunwind-exceptions --enable-libgcj-multifile
>> --enable-languages=c,c++,objc,obj-c++,java,fortran,ada
>> --enable-java-awt=gtk --disable-dssi --enable-plugin
>> --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre
>> --with-cpu=generic --host=x86_64-redhat-linux
>> Thread model: posix
>> gcc version 4.1.2 20080704 (Red Hat 4.1.2-44)
>>
>