Random Read Reduction for ChIP Seq Home
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r3chipseq-1.0-ParametersUsage.pdf
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There is a newer version of this page. You can find it here.
Please note that a valid MACS (http://liulab.dfci.harvard.edu/MACS/00README.html) installation must be present on your system to use this software.
A usage guide about parameter usage is attached.