Re: [PyWrapper-devel] MOBY info

[Skofic A. M. (IPGRI) <m.s...@cg...>]

I think a count can be very useful, like getting the number of =20
elements conforming to some condition. Also, it can be useful to have =20=

an idea of how many elements one must get, then use that number when =20
setting the secondary paging parameters.

I agree that search is enough for now, that covers most of the needs.

> The count operation is not available for use with biomoby. There is =20=

> no way in TAPIR, apart of using XSLT on top of it, to modify the =20
> response dynamically of a search result that has the count set to =20
> true.
Does this mean that in an output model you don't have access to the =20
response structure of a TAPIR result? for instance to this:
<summary start=3D"0" totalReturned=3D"0" totalMatched=3D"25008" />

Thanks!

Milko

On Nov 16, 2006, at 0:39 , Javier de la Torre wrote:

> Hi Milko,
>
> As you correctly said the moby2TapirFilterXslt just transform a =20
> biomoby message into a tapir filter, just the filter! not a full =20
> TAPIR request. Take a look at the XSLT, is pretty simple.
>
> As it is implemented right now the only operations that can be done =20=

> is a search...
>
> I implemented it like because with search is the only operation =20
> that you can do dynamic outputmodels and the only thing that it is =20
> needed to trasnform is the filter.
>
> The count operation is not available for use with biomoby. There is =20=

> no way in TAPIR, apart of using XSLT on top of it, to modify the =20
> response dynamically of a search result that has the count set to =20
> true.
>
> So, again, it is not possible to create biomoby services in =20
> pywrapper that uses a COUNT. What kind of services do you envision =20
> to do this? If you really need it then we can think about other =20
> possibilities but I dont know if this is necessary...
>
> Cheers.
>
> On 15/11/2006, at 19:50, Skofic A. Milko (IPGRI) wrote:
>
>> Javier, podr=EDas decirme cuando me podr=EDas dedicar un poco de =20
>> tiempo para comprender unas cosas de como implementas el MOBY?
>>
>> Te indico las cosas que no me son claras:
>>
>> El  <moby2TapirFilterXslt> que hace exactamente, transforma el =20
>> input Moby mensaje en el filtro te b=FAsqueda TAPIR? Si eso es la =20
>> verdad, solamente se necessita crear la parte <filter> de la =20
>> b=FAsqueda, lo otro es automatico?
>>
>> Si yo quer=EDa hacer un MOBY service que me da el COUNT de cuantos =20=

>> registros ha encontrado como puedo hacer? El problema es que esta =20
>> informaci=F3n me la devuelve el protocolo TAPIR, no el esquema que =20=

>> se utiliza.
>>
>> Yo har=EDa esta query;
>>
>> <?xml version=3D'1.0' encoding=3D'UTF-8'?>
>> <request>
>> 	<header>
>> 		<source =
accesspoint=3D"http://tapir.grinfo.net:8080/pywrapper/=20
>> pywrapper?dsa=3DEURISCO" sendtime=3D"2006-11-13T12:54:29.43"/>
>> 	</header>
>> 	<search count=3D'true' start=3D'0' limit=3D'0'>
>> 		<externalOutputModel =
location=3D"http://eurisco.ecpgr.org/models/=20
>> output/MCPD_EURISCO_1.00.xml"/>
>> 		<filter>
>> 			<like>
>> 				<concept id=3D'GENUS@mcpd_eurisco_100' =
/>
>> 				<literal value=3D'B*' />
>> 			</like>
>> 		</filter>
>> 		<orderBy>
>> 			<concept id=3D'ACCENUMB@mcpd_eurisco_100' />
>> 		</orderBy>
>> 	</search>
>> </request>
>>
>> Y TAPIR me devolver=EDa:
>>
>> <?xml version=3D"1.0" encoding=3D"utf-8"?>
>> <response xmlns=3D"http://rs.tdwg.org/tapir/1.0">
>>   <header>
>>     <source sendtime=3D"2006-11-15T19:26:50.57" accesspoint=3D"http://=20=

>> tapir.grinfo.net:8080/pywrapper/pywrapper?dsa=3DEURISCO_TEST">
>>       <software version=3D"2.1" name=3D"PyWrapper" />
>>     </source>
>>   </header>
>>   <!-- CONTENT START -->
>>   <search>
>>     <summary start=3D"0" totalReturned=3D"0" totalMatched=3D"25008" =
/>
>>   </search>
>>   <!-- CONTENT END -->
>>   <diagnostics></diagnostics>
>> </response>
>>
>> Ent=F3nces tendr=EDa que hacer un output model con la estructura del =20=

>> <response> mapeado a el MOBY type?
>>
>> Ciao!
>>
>> Milko
>


Milko A. Skofic (IPGRI)
International Plant Genetic Resources Institute
Via dei Tre Denari, 472/a
00057 Maccarese (RM)
ITALY
E-mail: m.s...@cg...
Tel: +30 06 6118286