From: Francesc A. <fa...@ca...> - 2005-05-14 07:24:07
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Hi Ryan, This seems an incompatibility between HDF5 library and the driver for the fat32 in Linux. I don't know who might be the ultimate responsible of the issue. You may want to issue a bug to the HDF5 (see http://hdf.ncsa.uiuc.edu/HDF5-FAQ.html#21) and see what they say about that. My opinion is, though, that using HDF5 on top of Linux and VFAT may kill the performance. It would be much better to create the files on a native Linux partition and then move the resulting files to the VFAT one. Cheers, Francesc On Friday 13 May 2005 22:19, Ryan Krauss wrote: > I have a problem running pytables on a Fat32 partition on Linux. If I > run the table2.py example from anywhere on my Linux partition, it works > fine. But if I copy it to somewhere on my fat32 partion, file.close() > generates the following error: > > HDF5-DIAG: Error detected in HDF5 library version: 1.6.4 thread 0. Back > trace follows. > #000: H5F.c line 2175 in H5Fflush(): flush failed > major(04): File interface > minor(29): Unable to initialize object > #001: H5F.c line 2849 in H5F_flush(): low level flush failed > major(05): Low-level I/O layer > minor(25): Write failed > #002: H5FD.c line 3578 in H5FD_flush(): driver flush request failed > major(22): Virtual File Layer > minor(29): Unable to initialize object > #003: H5FDsec2.c line 876 in H5FD_sec2_flush(): unable to extend file > properly > major(05): Low-level I/O layer > minor(23): Seek failed > > The same error occurs for any flush() or close() comand if the *.h5 file > is on the fat partition. My system is dual boot and all my research > files need to be on the fat partition to be accessible to both windows > and linux. > > Can someone help me with this? > > Thanks, > > Ryan > > > ------------------------------------------------------- > This SF.Net email is sponsored by Oracle Space Sweepstakes > Want to be the first software developer in space? > Enter now for the Oracle Space Sweepstakes! > http://ads.osdn.com/?ad_id=7393&alloc_id=16281&op=click > _______________________________________________ > Pytables-users mailing list > Pyt...@li... > https://lists.sourceforge.net/lists/listinfo/pytables-users |