Re: [Pytables-users] segmentation fault on Mac OS X Lion when running tables.test()

[Anthony S. <sc...@gm...>]

Hi David,

How did you build / install HDF5?

Be Well
Anthony

On Fri, Jun 15, 2012 at 7:14 PM, David Donovan <don...@gm...> wrote:

> Hi Everyone,
>
> I am having problems running the tests for PyTables on Mac OS X Lion.
> I have tried HDF5 version 1.8.5 as well, but I still get the same issue.
>
> Any thoughts would be helpful...
>
> Thanks for any help you can provide.
>
> Best Regards,
> David Donovan
>
>
> impPython 2.7.1 (r271:86832, Jul 31 2011, 19:30:53)
> [GCC 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2335.15.00)] on
> darwin
> Type "help", "copyright", "credits" or "license" for more information.
> >>> import tables
> table>>> tables.test()
>
> -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
> PyTables version:  2.3.1
> HDF5 version:      1.8.9
> NumPy version:     1.7.0.dev-0c5f480
> Numexpr version:   2.0.1 (not using Intel's VML/MKL)
> Zlib version:      1.2.5 (in Python interpreter)
> LZO version:       2.06 (Aug 12 2011)
> BZIP2 version:     1.0.6 (6-Sept-2010)
> Blosc version:     1.1.2 (2010-11-04)
> Cython version:    0.16
> Python version:    2.7.1 (r271:86832, Jul 31 2011, 19:30:53)
> [GCC 4.2.1 (Based on Apple Inc. build 5658) (LLVM build 2335.15.00)]
> Platform:          darwin-i386
> Byte-ordering:     little
> Detected cores:    2
>
> -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
> Performing only a light (yet comprehensive) subset of the test suite.
> If you want a more complete test, try passing the --heavy flag to this
> script
> (or set the 'heavy' parameter in case you are using tables.test() call).
> The whole suite will take more than 4 hours to complete on a relatively
> modern CPU and around 512 MB of main memory.
>
> -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
>
> .....................................................................................................................................FSegmentation
> fault: 11
>
>
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