Obtaining PySparse from git+http://git.code.sf.net/p/pysparse/git#egg=PySparse
Updating ./src/pysparse clone
Requirement already satisfied: numpy>=1.2 in /usr/local/lib/python2.7/dist-packages/numpy-1.11.0-py2.7-linux-x86_64.egg (from PySparse)
Installing collected packages: PySparse
Running setup.py develop for PySparse
Complete output from command /usr/bin/python -c "import setuptools, tokenize;file='/home/masterli/PRJS/pysparse/src/pysparse/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" develop --no-deps:
/usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'summary'
warnings.warn(msg)
--- Could not run svn info ---
blas_opt_info:
blas_mkl_info:
libraries mkl,vml,guide not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE
openblas_info:librariesopenblasnotfoundin['/usr/local/lib','/usr/lib','/usr/lib/x86_64-linux-gnu']NOTAVAILABLEatlas_3_10_blas_threads_info:SettingPTATLAS=ATLASlibrariestatlasnotfoundin['/usr/local/lib','/usr/lib','/usr/lib/x86_64-linux-gnu']NOTAVAILABLEatlas_3_10_blas_info:librariessatlasnotfoundin['/usr/local/lib','/usr/lib','/usr/lib/x86_64-linux-gnu']NOTAVAILABLEatlas_blas_threads_info:SettingPTATLAS=ATLASlibrariesptf77blas,ptcblas,atlasnotfoundin['/usr/local/lib','/usr/lib','/usr/lib/x86_64-linux-gnu']NOTAVAILABLEatlas_blas_info:librariesf77blas,cblas,atlasnotfoundin['/usr/local/lib','/usr/lib','/usr/lib/x86_64-linux-gnu']NOTAVAILABLE/usr/local/lib/python2.7/dist-packages/numpy-1.11.0-py2.7-linux-x86_64.egg/numpy/distutils/system_info.py:1640:UserWarning:Atlas(http://math-atlas.sourceforge.net/)librariesnotfound.Directoriestosearchforthelibrariescanbespecifiedinthenumpy/distutils/site.cfgfile(section[atlas])orbysettingtheATLASenvironmentvariable.warnings.warn(AtlasNotFoundError.__doc__)blas_info:Ccompiler:cccreating/tmp/tmp7w5UgB/tmpcreating/tmp/tmp7w5UgB/tmp/tmp7w5UgBcompileoptions:'-I/usr/local/include -I/usr/include -c'cc:/tmp/tmp7w5UgB/source.ccc/tmp/tmp7w5UgB/tmp/tmp7w5UgB/source.o -lcblas -o /tmp/tmp7w5UgB/a.out/usr/bin/ld:nepeuttrouver-lcblascollect2:error:ldreturned1exitstatus/usr/bin/ld:nepeuttrouver-lcblascollect2:error:ldreturned1exitstatuscc/tmp/tmp7w5UgB/tmp/tmp7w5UgB/source.o -lblas -o /tmp/tmp7w5UgB/a.outlibrariesblasnotfoundin['','']Runtimelibraryblaswasnotfound.IgnoringFOUND:libraries=['blas','blas']library_dirs=['/usr/lib']language=cdefine_macros=[('HAVE_CBLAS',None)]FOUND:libraries=['blas','blas']library_dirs=['/usr/lib']define_macros=[('NO_ATLAS_INFO',1),('HAVE_CBLAS',None)]language=cSparse::UsingBLASinfo:{'libraries':['blas','blas'],'library_dirs':['/usr/lib'],'language':'c','define_macros':[('NO_ATLAS_INFO',1),('HAVE_CBLAS',None)]}Usingdflt_lib_dirs=[]Usingdflt_libs=[]Eigen::UsingBLASinfo:{'libraries':['blas','blas'],'library_dirs':['/usr/lib'],'language':'c','define_macros':[('NO_ATLAS_INFO',1),('HAVE_CBLAS',None)]}lapack_opt_info:openblas_lapack_info:librariesopenblasnotfoundin['/usr/local/lib','/usr/lib','/usr/lib/x86_64-linux-gnu']NOTAVAILABLElapack_mkl_info:mkl_info:librariesmkl,vml,guidenotfoundin['/usr/local/lib','/usr/lib','/usr/lib/x86_64-linux-gnu']NOTAVAILABLENOTAVAILABLEatlas_3_10_threads_info:SettingPTATLAS=ATLASlibrariestatlas,tatlasnotfoundin/usr/local/liblibrarieslapack_atlasnotfoundin/usr/local/liblibrariestatlas,tatlasnotfoundin/usr/liblibrarieslapack_atlasnotfoundin/usr/liblibrariestatlas,tatlasnotfoundin/usr/lib/x86_64-linux-gnulibrarieslapack_atlasnotfoundin/usr/lib/x86_64-linux-gnu<class'numpy.distutils.system_info.atlas_3_10_threads_info'>NOTAVAILABLEatlas_3_10_info:librariessatlas,satlasnotfoundin/usr/local/liblibrarieslapack_atlasnotfoundin/usr/local/liblibrariessatlas,satlasnotfoundin/usr/liblibrarieslapack_atlasnotfoundin/usr/liblibrariessatlas,satlasnotfoundin/usr/lib/x86_64-linux-gnulibrarieslapack_atlasnotfoundin/usr/lib/x86_64-linux-gnu<class'numpy.distutils.system_info.atlas_3_10_info'>NOTAVAILABLEatlas_threads_info:SettingPTATLAS=ATLASlibrariesptf77blas,ptcblas,atlasnotfoundin/usr/local/liblibrarieslapack_atlasnotfoundin/usr/local/liblibrariesptf77blas,ptcblas,atlasnotfoundin/usr/liblibrarieslapack_atlasnotfoundin/usr/liblibrariesptf77blas,ptcblas,atlasnotfoundin/usr/lib/x86_64-linux-gnulibrarieslapack_atlasnotfoundin/usr/lib/x86_64-linux-gnu<class'numpy.distutils.system_info.atlas_threads_info'>NOTAVAILABLEatlas_info:librariesf77blas,cblas,atlasnotfoundin/usr/local/liblibrarieslapack_atlasnotfoundin/usr/local/liblibrariesf77blas,cblas,atlasnotfoundin/usr/liblibrarieslapack_atlasnotfoundin/usr/liblibrariesf77blas,cblas,atlasnotfoundin/usr/lib/x86_64-linux-gnulibrarieslapack_atlasnotfoundin/usr/lib/x86_64-linux-gnu<class'numpy.distutils.system_info.atlas_info'>NOTAVAILABLE/usr/local/lib/python2.7/dist-packages/numpy-1.11.0-py2.7-linux-x86_64.egg/numpy/distutils/system_info.py:1542:UserWarning:Atlas(http://math-atlas.sourceforge.net/)librariesnotfound.Directoriestosearchforthelibrariescanbespecifiedinthenumpy/distutils/site.cfgfile(section[atlas])orbysettingtheATLASenvironmentvariable.warnings.warn(AtlasNotFoundError.__doc__)lapack_info:librarieslapacknotfoundin['','']Runtimelibrarylapackwasnotfound.IgnoringFOUND:libraries=['lapack','lapack']library_dirs=['/usr/lib']language=f77FOUND:libraries=['lapack','lapack','blas','blas']library_dirs=['/usr/lib']define_macros=[('NO_ATLAS_INFO',1),('HAVE_CBLAS',None)]language=c/usr/local/lib/python2.7/dist-packages/setuptools/dist.py:332:UserWarning:Normalizing'1.3-dev'to'1.3.dev0'normalized_version,Eigen::UsingLAPACKinfo:{'libraries':['lapack','lapack','blas','blas'],'library_dirs':['/usr/lib'],'language':'c','define_macros':[('NO_ATLAS_INFO',1),('HAVE_CBLAS',None)]}Direct::UsingBLASinfo:{'libraries':['blas','blas'],'library_dirs':['/usr/lib'],'language':'c','define_macros':[('NO_ATLAS_INFO',1),('HAVE_CBLAS',None)]}UsingdefaultUMFPACKandAMDIfyoudonotlikethis,editthe[UMFPACK]and[AMD]sectionsofsite.cfgUsingdefaultSuperLU.Ifyoudonotlikethis,editthe[SuperLU]sectionofsite.cfgrunningdeveloprunningbuild_scriptsrunningegg_inforunningbuild_srcbuild_srcbuildingpy_modulessourcesbuildingextension"pysparse.sparse.spmatrix"sourcesbuildingextension"pysparse.eigen.jdsym"sourcesbuildingextension"pysparse.direct.umfpack"sourcesbuildingextension"pysparse.direct.superlu"sourcesbuildingextension"pysparse.itsolvers.krylov"sourcesbuildingextension"pysparse.precon.precon"sourcesbuildingdata_filessourcesbuild_src:buildingnpy-pkgconfigfileswritingrequirementstopysparse.egg-info/requires.txtwritingpysparse.egg-info/PKG-INFOwritingtop-levelnamestopysparse.egg-info/top_level.txtwritingdependency_linkstopysparse.egg-info/dependency_links.txtreadingmanifestfile'pysparse.egg-info/SOURCES.txt'writingmanifestfile'pysparse.egg-info/SOURCES.txt'runningbuild_extcustomizeUnixCCompilercustomizeUnixCCompilerusingbuild_extbuilding'pysparse.direct.superlu'extensioncompilingCsourcesCcompiler:x86_64-linux-gnu-gcc-pthread-DNDEBUG-g-fwrapv-O2-Wall-Wstrict-prototypes-fno-strict-aliasing-Wdate-time-D_FORTIFY_SOURCE=2-g-fstack-protector-strong-Wformat-Werror=format-security-fPICcompileoptions:'-DUSE_VENDOR_BLAS=1 -DNO_ATLAS_INFO=1 -DHAVE_CBLAS -Ipysparse/direct/src -Ipysparse/direct/superlu/include -I/usr/local/lib/python2.7/dist-packages/numpy-1.11.0-py2.7-linux-x86_64.egg/numpy/core/include -I/usr/local/lib/python2.7/dist-packages/numpy-1.11.0-py2.7-linux-x86_64.egg/numpy/core/include -I/home/masterli/PRJS/pysparse/src/pysparse/pysparse/include -I/usr/include/python2.7 -I/usr/include/python2.7 -c'x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/sp_ienv.cpysparse/direct/superlu/src/sp_ienv.c:Infunction‘sp_ienv’:pysparse/direct/superlu/src/sp_ienv.c:57:5:warning:implicitdeclarationoffunction‘xerbla_’[-Wimplicit-function-declaration]xerbla_("sp_ienv",&i);^~~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/icmax1.cpysparse/direct/superlu/src/icmax1.c:Infunction‘icmax1_’:pysparse/direct/superlu/src/icmax1.c:52:24:warning:variable‘i__2’setbutnotused[-Wunused-but-set-variable]intret_val,i__1,i__2;^~~~pysparse/direct/superlu/src/icmax1.c:52:18:warning:variable‘i__1’setbutnotused[-Wunused-but-set-variable]intret_val,i__1,i__2;^~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dreadhb.cpysparse/direct/superlu/src/dreadhb.c:Infunction‘dreadhb’:pysparse/direct/superlu/src/dreadhb.c:171:29:warning:unusedvariable‘key’[-Wunused-variable]charbuf[100],type[4],key[10];^~~pysparse/direct/superlu/src/dreadhb.c:Infunction‘dReadVector’:pysparse/direct/superlu/src/dreadhb.c:61:2:warning:ignoringreturnvalueof‘fgets’,declaredwithattributewarn_unused_result[-Wunused-result]fgets(buf,100,fp);/* read a line at a time */^~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:Infunction‘dReadValues’:pysparse/direct/superlu/src/dreadhb.c:81:2:warning:ignoringreturnvalueof‘fgets’,declaredwithattributewarn_unused_result[-Wunused-result]fgets(buf,100,fp);/* read a line at a time */^~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:Infunction‘dreadhb’:pysparse/direct/superlu/src/dreadhb.c:177:5:warning:ignoringreturnvalueof‘fgets’,declaredwithattributewarn_unused_result[-Wunused-result]fgets(buf,100,fp);^~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:189:2:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%14c",buf);buf[14]=0;^~~~~~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:197:5:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%3c",type);^~~~~~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:198:5:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%11c",buf);/* pad */^~~~~~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:204:5:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%14c",buf);sscanf(buf,"%d",nrow);^~~~~~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:205:5:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%14c",buf);sscanf(buf,"%d",ncol);^~~~~~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:206:5:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%14c",buf);sscanf(buf,"%d",nonz);^~~~~~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:207:5:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%14c",buf);sscanf(buf,"%d",&tmp);^~~~~~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:219:5:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%16c",buf);^~~~~~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:221:5:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%16c",buf);^~~~~~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:223:5:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%20c",buf);^~~~~~~~~~~~~~~~~~~~~~~pysparse/direct/superlu/src/dreadhb.c:225:5:warning:ignoringreturnvalueof‘fscanf’,declaredwithattributewarn_unused_result[-Wunused-result]fscanf(fp,"%20c",buf);^~~~~~~~~~~~~~~~~~~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/relax_snode.cInfileincludedfrompysparse/direct/superlu/src/relax_snode.c:21:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/relax_snode.c:Infunction‘relax_snode’:pysparse/direct/superlu/src/relax_snode.c:41:18:warning:unusedvariable‘i’[-Wunused-variable]registerinti,j,parent;^x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/scomplex.cInfileincludedfrompysparse/direct/superlu/src/scomplex.c:15:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dsp_blas2.cInfileincludedfrompysparse/direct/superlu/src/dsp_blas2.c:16:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/dsp_blas2.c:Infunction‘sp_dtrsv’:pysparse/direct/superlu/src/dsp_blas2.c:154:7:warning:implicitdeclarationoffunction‘dtrsv_’[-Wimplicit-function-declaration]dtrsv_("L","N","U",&nsupc,&Lval[luptr],&nsupr,^~~~~~pysparse/direct/superlu/src/dsp_blas2.c:157:7:warning:implicitdeclarationoffunction‘dgemv_’[-Wimplicit-function-declaration]dgemv_("N",&nrow,&nsupc,&alpha,&Lval[luptr+nsupc],^~~~~~pysparse/direct/superlu/src/dsp_blas2.c:Infunction‘sp_dgemv’:pysparse/direct/superlu/src/dsp_blas2.c:392:53:warning:suggestparenthesesaround‘&&’within‘||’[-Wparentheses]if(A->nrow==0||A->ncol==0||alpha==0.&&beta==1.)~~~~~~~~~~~~^~~~~~~~~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dlangs.cInfileincludedfrompysparse/direct/superlu/src/dlangs.c:16:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/dlangs.c:Infunction‘dlangs’:pysparse/direct/superlu/src/dlangs.c:109:12:warning:‘value’maybeuseduninitializedinthisfunction[-Wmaybe-uninitialized]return(value);^x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dmemory.cInfileincludedfrompysparse/direct/superlu/src/dmemory.c:11:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/dmemory.c:Infunction‘dStackCompress’:pysparse/direct/superlu/src/dmemory.c:583:21:warning:unusedvariable‘dest’[-Wunused-variable]char*src,*dest;^~~~pysparse/direct/superlu/src/dmemory.c:583:15:warning:unusedvariable‘src’[-Wunused-variable]char*src,*dest;^~~pysparse/direct/superlu/src/dmemory.c:581:32:warning:unusedvariable‘bytes_to_copy’[-Wunused-variable]registerintiword,dword,bytes_to_copy,ndim;^~~~~~~~~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/sp_coletree.cInfileincludedfrompysparse/direct/superlu/src/sp_coletree.c:6:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/mmd.cx86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dgsequ.cInfileincludedfrompysparse/direct/superlu/src/dgsequ.c:16:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dcomplex.cInfileincludedfrompysparse/direct/superlu/src/dcomplex.c:15:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dcolumn_dfs.cInfileincludedfrompysparse/direct/superlu/src/dcolumn_dfs.c:24:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/dcolumn_dfs.c:Infunction‘dcolumn_dfs’:pysparse/direct/superlu/src/dcolumn_dfs.c:129:3:warning:suggestparenthesesaroundassignmentusedastruthvalue[-Wparentheses]if(mem_error=dLUMemXpand(jcol,nextl,LSUB,&nzlmax,Glu))^~pysparse/direct/superlu/src/dcolumn_dfs.c:172:7:warning:suggestparenthesesaroundassignmentusedastruthvalue[-Wparentheses]dLUMemXpand(jcol,nextl,LSUB,&nzlmax,Glu))^~~~~~~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dpanel_bmod.cInfileincludedfrompysparse/direct/superlu/src/dpanel_bmod.c:26:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/dpanel_bmod.c:33:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoiddcheck_tempv();^~~~~~pysparse/direct/superlu/src/dpanel_bmod.c:Infunction‘dpanel_bmod’:pysparse/direct/superlu/src/dpanel_bmod.c:217:7:warning:implicitdeclarationoffunction‘dtrsv_’[-Wimplicit-function-declaration]dtrsv_("L","N","U",&segsze,&lusup[luptr],^~~~~~pysparse/direct/superlu/src/dpanel_bmod.c:264:7:warning:implicitdeclarationoffunction‘dgemv_’[-Wimplicit-function-declaration]dgemv_("N",&block_nrow,&segsze,&alpha,&lusup[luptr1],^~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dpivotL.cInfileincludedfrompysparse/direct/superlu/src/dpivotL.c:26:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dcolumn_bmod.cInfileincludedfrompysparse/direct/superlu/src/dcolumn_bmod.c:26:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/dcolumn_bmod.c:Infunction‘dcolumn_bmod’:pysparse/direct/superlu/src/dcolumn_bmod.c:217:3:warning:implicitdeclarationoffunction‘dtrsv_’[-Wimplicit-function-declaration]dtrsv_("L","N","U",&segsze,&lusup[luptr],^~~~~~pysparse/direct/superlu/src/dcolumn_bmod.c:228:3:warning:implicitdeclarationoffunction‘dgemv_’[-Wimplicit-function-declaration]dgemv_("N",&nrow,&segsze,&alpha,&lusup[luptr],^~~~~~pysparse/direct/superlu/src/dcolumn_bmod.c:271:2:warning:suggestparenthesesaroundassignmentusedastruthvalue[-Wparentheses]if(mem_error=dLUMemXpand(jcol,nextlu,LUSUP,&nzlumax,Glu))^~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/lsame.cpysparse/direct/superlu/src/lsame.c:Infunction‘lsame_’:pysparse/direct/superlu/src/lsame.c:55:18:warning:suggestparenthesesaround‘&&’within‘||’[-Wparentheses]if(inta>=129&&inta<=137||inta>=145&&inta<=153||inta~~~~~~~~~~~~^~~~~~~~~~~~~~pysparse/direct/superlu/src/lsame.c:56:10:warning:suggestparenthesesaround‘&&’within‘||’[-Wparentheses]if(inta>=129&&inta<=137||inta>=145&&inta<=153||inta~~~~>=162&&inta<=169)~~~~~~~^~~~~~~~~~~~~~pysparse/direct/superlu/src/lsame.c:58:18:warning:suggestparenthesesaround‘&&’within‘||’[-Wparentheses]if(intb>=129&&intb<=137||intb>=145&&intb<=153||intb~~~~~~~~~~~~^~~~~~~~~~~~~~pysparse/direct/superlu/src/lsame.c:59:10:warning:suggestparenthesesaround‘&&’within‘||’[-Wparentheses]if(intb>=129&&intb<=137||intb>=145&&intb<=153||intb~~~~>=162&&intb<=169)~~~~~~~^~~~~~~~~~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dsnode_dfs.cInfileincludedfrompysparse/direct/superlu/src/dsnode_dfs.c:24:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/dsnode_dfs.c:Infunction‘dsnode_dfs’:pysparse/direct/superlu/src/dsnode_dfs.c:75:7:warning:suggestparenthesesaroundassignmentusedastruthvalue[-Wparentheses]if(mem_error=dLUMemXpand(jcol,nextl,LSUB,&nzlmax,Glu))^~pysparse/direct/superlu/src/dsnode_dfs.c:88:6:warning:suggestparenthesesaroundassignmentusedastruthvalue[-Wparentheses]if(mem_error=dLUMemXpand(jcol,nextl,LSUB,&nzlmax,Glu))^~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dlacon.cx86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dsp_blas3.cInfileincludedfrompysparse/direct/superlu/src/dsp_blas3.c:16:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/dgstrf.cInfileincludedfrompysparse/direct/superlu/src/dgstrf.c:25:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/dgstrf.c:Infunction‘dgstrf’:pysparse/direct/superlu/src/dgstrf.c:296:3:warning:suggestparenthesesaroundassignmentusedastruthvalue[-Wparentheses]if(*info=dLUMemXpand(jcol,nextlu,LUSUP,&nzlumax,&Glu))^~pysparse/direct/superlu/src/dgstrf.c:311:9:warning:suggestparenthesesaroundassignmentusedastruthvalue[-Wparentheses]iperm_r,iperm_c,&pivrow,&Glu))^~~~~~~pysparse/direct/superlu/src/dgstrf.c:366:9:warning:suggestparenthesesaroundassignmentusedastruthvalue[-Wparentheses]iperm_r,iperm_c,&pivrow,&Glu))^~~~~~~pysparse/direct/superlu/src/dgstrf.c:310:16:warning:‘iperm_r’maybeuseduninitializedinthisfunction[-Wmaybe-uninitialized]if(*info=dpivotL(icol,diag_pivot_thresh,&usepr,perm_r,^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iperm_r,iperm_c,&pivrow,&Glu))~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/xerbla.cpysparse/direct/superlu/src/xerbla.c:Infunction‘xerbla_’:pysparse/direct/superlu/src/xerbla.c:33:5:warning:implicitdeclarationoffunction‘printf’[-Wimplicit-function-declaration]printf("** On entry to %6s, parameter number %2d had an illegal value\n",^~~~~~pysparse/direct/superlu/src/xerbla.c:33:5:warning:incompatibleimplicitdeclarationofbuilt-infunction‘printf’pysparse/direct/superlu/src/xerbla.c:33:5:note:include‘<stdio.h>’orprovideadeclarationof‘printf’x86_64-linux-gnu-gcc:pysparse/direct/superlu/src/util.cInfileincludedfrompysparse/direct/superlu/src/util.c:23:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/util.c:Infunction‘superlu_abort_and_exit’:pysparse/direct/superlu/src/util.c:32:5:error:formatnotastringliteralandnoformatarguments[-Werror=format-security]fprintf(stderr,msg);^~~~~~~pysparse/direct/superlu/src/util.c:Attoplevel:pysparse/direct/superlu/src/util.c:251:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]StatFree()^~~~~~~~pysparse/direct/superlu/src/util.c:260:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]LUFactFlops()^~~~~~~~~~~pysparse/direct/superlu/src/util.c:266:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]LUSolveFlops()^~~~~~~~~~~~cc1:somewarningsbeingtreatedaserrorsInfileincludedfrompysparse/direct/superlu/src/util.c:23:0:pysparse/direct/superlu/include/util.h:94:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externvoidStatFree();^~~~~~pysparse/direct/superlu/include/util.h:100:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]externdoubleSuperLU_timer_();^~~~~~pysparse/direct/superlu/src/util.c:Infunction‘superlu_abort_and_exit’:pysparse/direct/superlu/src/util.c:32:5:error:formatnotastringliteralandnoformatarguments[-Werror=format-security]fprintf(stderr,msg);^~~~~~~pysparse/direct/superlu/src/util.c:Attoplevel:pysparse/direct/superlu/src/util.c:251:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]StatFree()^~~~~~~~pysparse/direct/superlu/src/util.c:260:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]LUFactFlops()^~~~~~~~~~~pysparse/direct/superlu/src/util.c:266:1:warning:functiondeclarationisn’taprototype[-Wstrict-prototypes]LUSolveFlops()^~~~~~~~~~~~cc1:somewarningsbeingtreatedaserrorserror:Command"x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fstack-protector-strong -Wformat -Werror=format-security -fPIC -DUSE_VENDOR_BLAS=1 -DNO_ATLAS_INFO=1 -DHAVE_CBLAS -Ipysparse/direct/src -Ipysparse/direct/superlu/include -I/usr/local/lib/python2.7/dist-packages/numpy-1.11.0-py2.7-linux-x86_64.egg/numpy/core/include -I/usr/local/lib/python2.7/dist-packages/numpy-1.11.0-py2.7-linux-x86_64.egg/numpy/core/include -I/home/masterli/PRJS/pysparse/src/pysparse/pysparse/include -I/usr/include/python2.7 -I/usr/include/python2.7 -c pysparse/direct/superlu/src/util.c -o build/temp.linux-x86_64-2.7/pysparse/direct/superlu/src/util.o"failedwithexitstatus1----------------------------------------
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I got this error:
Obtaining PySparse from git+http://git.code.sf.net/p/pysparse/git#egg=PySparse
Updating ./src/pysparse clone
Requirement already satisfied: numpy>=1.2 in /usr/local/lib/python2.7/dist-packages/numpy-1.11.0-py2.7-linux-x86_64.egg (from PySparse)
Installing collected packages: PySparse
Running setup.py develop for PySparse
Complete output from command /usr/bin/python -c "import setuptools, tokenize;file='/home/masterli/PRJS/pysparse/src/pysparse/setup.py';f=getattr(tokenize, 'open', open)(file);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, file, 'exec'))" develop --no-deps:
/usr/lib/python2.7/distutils/dist.py:267: UserWarning: Unknown distribution option: 'summary'
warnings.warn(msg)
--- Could not run svn info ---
blas_opt_info:
blas_mkl_info:
libraries mkl,vml,guide not found in ['/usr/local/lib', '/usr/lib', '/usr/lib/x86_64-linux-gnu']
NOT AVAILABLE