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#11 Import of SBML that references "time" in event assgn fails

open
None
7
2011-07-05
2011-07-04
Anonymous
No

I have an SBML file that uses:
<csymbol encoding="text" definitionURL="http://www.sbml.org/sbml/symbols/time"> time </csymbol>
(a) in an event trigger and (b) in an event assignment.

Converting the SBML to PSC and loading the resulting file works fine for (a) but (b) fails with the error in the file attached.

The event that causes the error is of the form:

<event id="event_1" name="time event">
<trigger>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<gt/>
<ci> parameter_31 </ci>
<cn> 3600 </cn>
</apply>
</math>
</trigger>
<listOfEventAssignments>
<eventAssignment variable="parameter_55">
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<csymbol encoding="text" definitionURL="http://www.sbml.org/sbml/symbols/time"> time </csymbol>
</apply>
</math>
</eventAssignment>
</listOfEventAssignments>
</event>

Discussion

  • Brett Olivier

    Brett Olivier - 2011-07-05
    • priority: 5 --> 7
    • assigned_to: nobody --> bgoli
     
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