error with pyrx 1.1_error local variable 'targetName' referenced before assignment

[faizah fulyani]

hi everyone,

i am new to pyrx and everytime i run vina, i got this log error. what step that i missed here?

ERROR|2025-07-16 14:18:27,039|Open C:\pyrx_dir\latihan01\Macromolecules\1bdg_receptor\39562_uff_e=345.55_out.pdbqt for details.
local variable 'targetName' referenced before assignment

[Sarkis Dallakian]

Replace C:\pyrx_dir\latihan01 with C:\pyrx_dir\latihan01_workspace

[faizah fulyani]

Hi Sarkiss,
i did, and now the pyrx wont start at all
it gave the following error
[image: image.png]

On Wed, Jul 16, 2025 at 10:08 PM Sarkis Dallakian sarkiss@users.sourceforge.net wrote:

Replace C:\pyrx_dir\latihan01 with C:\pyrx_dir\latihan01_workspace

error with pyrx 1.1_error local variable 'targetName' referenced before
assignment
https://sourceforge.net/p/pyrx/discussion/general/thread/19e2d845fc/?limit=25#c324/fc1c

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Kind Regards,

Faizah Fulyani, Ph.D
Medical Biology and Biochemistry div.
Faculty of Medicine Diponegoro University
Jl. Prof. H. Soedarto, SH, Tembalang
Semarang, Central Java, Indonesia 50275
E-mail: f.fulyani@fk.undip.ac.id

[Sarkis Dallakian]

Please undo it and use the same logic you used to set the workspace to C:\pyrx_dir\latihan01 and set it to the same with added _workspace. You can also change the workspace by editing the PyRx_workspace/preferences.ini in your home folder.

[faizah fulyani]

now this error appear and it wont start at all
Traceback (most recent call last):
File "C:\Program Files\PyRx\1.1\runPyRx.py", line 89, in <module>
startPyRx()
File "C:\Program Files\PyRx\1.1\runPyRx.py", line 38, in startPyRx
frame = MainFrame(None, -1, size=(width, height-200))
File "C:\Program Files\PyRx\1.1\lib\site-packages\PyRx\wxMainFrame.py", line 167, in init
self.autodockNav = AutoDockNavigator(self) # Navigator -> AutoDock tab
File "C:\Program Files\PyRx\1.1\lib\site-packages\PyRx\autodockNavigator.py", line 37, in init
self.vsModel = VSModel()
File "C:\Program Files\PyRx\1.1\lib\site-packages\PyRx\vsModel.py", line 286, in init
os.mkdir(basePath)
WindowsError: [Error 3] The system cannot find the path specified: 'C:\pyrx_dir\latihan01_workspace'</module>

Problem starting PyRx. Please submit a bug report to fix this: http://pyrx.sourceforge.net/faq