I am using yt module to try to upload .dat files from PyRaTE files but for some reason, they will not load. I had success in uploading example files from yt-project.org; however, the website itself doesn't show how to format the files so they will be uploaded and utilized properly. I also will be uploading class and .12m files as well. Does anyone know an approach to this? Thank you, Jayden
Hi everyone I tried to use the thread option but i have only 1 Cpu working. I'm not...
improved proposals BDMCMC, minor changes RTT plot
PyRateContinuous with multiple baseline rates
bug fixes
bug fixes
fixes for extinct clades
fixed marginal rates and RTT for long extinct c...
new option in calc_marginal_likelihood function
added flags and non-uniform priors on indicators
bug fixes
MCDD model with horseshoe prior instead of BVS
fixed issue importing lib_utilities in function...
rm marginal likelihood calculation
Fixed exp prior and single clade analysis
PyRateContinuousM - multiple baseline rates/cor...
corrected rescaling
work in progress (little baseline rates for PyR...
prep multiple Q
PyRateContinuous with multiple baseline rates -...
Update README.md
fixes for extinct clades
added function to calculate marginal likelihood
improved RTT plot function (-plot)
new refs.
updated references
pyrate 0.580
Update README.md
added additional check of input file structure
added flag for win size
additional modules for PyRateContinuous and PyR...
added Gibbs sampling and species identifiers
PyRateContinuous
Multiple clade diversity dependence (Silvestro ...
Update README.md
Update lib_utilities.py
now imports modules from prate_lib
added option to log transform trait data
added exponential prior function for MCDD model
fixed multiplier proposal in lib_updates
bug fix
added condition in HPP likelihood
minor edits
cosmetic changes
fixed prior on indicator parameters
old versions replaced by PyRateContinuous and P...
print elapsed time
added option to log transform trait data
updated references
added option to floor-round logged values
removed old version
bug fix
pyrate version 0.570
Update README.md
fixed issue with empty last column
clean up
bug fix
Initial commit
bug fixes
added os.fsync()
MCC model - Silvestro et al in prep.
fixed extra tab in log file
better implementation of the csv writer
pyrate version with hyper-priors on b/d rates
Create README.md
bug fixes
