Hi,
I think that:
* You have a couple chains in a monomer.
* You have to know which chains build a monomer.
* Then you create a new object from these chains. E.g. create monomer,
chain A1 or chain B1 or chain C1 or etc... (here the "or" is an operator
and it does not indicate that I do not know which chain you need)
* You can likely simplify the selection; I guess that all chains with
the same digit/number build a monomer, thus you can use a wild char for
selection:
create monomer1, chain *1
create monomer2, chain *2
* Then file, save molecule, and select the "monomer" object for saving
Bests, tamas
On 7/4/20 7:58 AM, Dr. Subramanian, Senthil Kumar wrote:
>
> Hello,
>
> I am new to PyMOL. I would like to work with the monomer structure of
> PDB id: 5zf0, not the entire structure of how they have shown (two
> trimers against each other). Is there any way I could extract monomer
> from trimers structure and save it as a PDB? Your help is very much
> appreciated.
>
> Thank you.
>
> Kind regards,
>
> Senthil
>
>
>
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