From: Lucas B. <lbl...@ya...> - 2005-06-11 00:15:14
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I've recently came into a problem with PyMol version 0.98. As it generaly raytrace correctly most pictures I generate, I think the only difference in this case is that it contains a "isomesh" around a ligand generated from an electron density map. When I use the command "ray 1600, 1200" and then save a .png file I do not get a 1600x1200 ray-traced image, but a picture with the size of the window as shown before typing the command (i. e., not ray-traced). I use Fedora Core 2, but saving the session as a .pse file and trying to ray trace the image on another computer on my research group running Pymol v0.98 on Windows XP also led to the same result. On that case, it also seemed to face problems with long file/directory names. Any hint? Thanks in advance, Lucas Bleicher ___________________________________________________________________________ Appel audio GRATUIT partout dans le monde avec le nouveau Yahoo! Messenger Téléchargez cette version sur http://fr.messenger.yahoo.com |
From: Warren D. <wa...@de...> - 2005-06-11 01:30:06
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Lucas, The movie may be playing...try clicking the stop button or using the = mstop command. Cheers, Warren -- Warren L. DeLano, Ph.D. =20 Principal Scientist . DeLano Scientific LLC =20 . 400 Oyster Point Blvd., Suite 213 =20 . South San Francisco, CA 94080 USA =20 . Biz:(650)-872-0942 Tech:(650)-872-0834 =20 . Fax:(650)-872-0273 Cell:(650)-346-1154 . mailto:wa...@de... =20 =20 > -----Original Message----- > From: pym...@li...=20 > [mailto:pym...@li...] On Behalf Of=20 > Lucas Bleicher > Sent: Friday, June 10, 2005 5:15 PM > To: pym...@li... > Subject: [PyMOL] Cannot raytrace images containing electron=20 > densities in v0.98 >=20 > I've recently came into a problem with PyMol version 0.98.=20 > As it generaly raytrace correctly most pictures I generate, I=20 > think the only difference in this case is that it contains a=20 > "isomesh" around a ligand generated from an electron density=20 > map. When I use the command "ray 1600, 1200" and then save a=20 > .png file I do not get a 1600x1200 ray-traced image, but a=20 > picture with the size of the window as shown before typing=20 > the command (i. e., not ray-traced). I use Fedora Core 2, but=20 > saving the session as a .pse file and trying to ray trace the=20 > image on another computer on my research group running Pymol=20 > v0.98 on Windows XP also led to the same result. On that=20 > case, it also seemed to face problems with long=20 > file/directory names. Any hint? >=20 > Thanks in advance, > Lucas Bleicher >=20 >=20 > =09 >=20 > =09 > =09 > ______________________________________________________________ > _____________ > Appel audio GRATUIT partout dans le monde avec le nouveau=20 > Yahoo! Messenger T=E9l=E9chargez cette version sur=20 > http://fr.messenger.yahoo.com >=20 >=20 > ------------------------------------------------------- > This SF.Net email is sponsored by: NEC IT Guy Games. How far=20 > can you shotput a projector? How fast can you ride your desk=20 > chair down the office luge track? > If you want to score the big prize, get to know the little guy. =20 > Play to win an NEC 61" plasma display:=20 > http://www.necitguy.com/?r=3D20=20 > _______________________________________________ > PyMOL-users mailing list > PyM...@li... > https://lists.sourceforge.net/lists/listinfo/pymol-users >=20 |