I am a newbie in Linux, and recently installed Coot, Pymol and VMD on
Ubuntu 12.04. It took me a while to figure out a strange conflict among
them on my machine. If I remove the mesa-swx11 package, Coot becomes
crazily slow. However, if I include that package, which requires the remove
of mesa-glx, the backgrounds of Pymol and VMD becomes transparent, and you
can barely see the molecule.
Does anyone have some suggestions?
Thank you so much!
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