I am trying to use pymol as a 3d plotting tool.
I have few questions
1)Is there a way to add represenation in pymol. ?
For instance I would like to see the atom as a triangle or nhedron.
I was going through CGO objects that looks promising to what I want to
accomplish. What I am looking for is to add represenation module and use
2)Is there a method to represent a group of atoms connected by cartoon even
if the chains are not biologically feasable. What I am looking for is you
have bunch of points(atoms) through which the ribbon should pass like a
Any inputs and pointers would be most appreciated.
I am trying to use PyMol for doing viz on Nano scale structures which have
very different bonding structures than protiens,etc. So I will not be using
any bond generation algorithms. I provide connect info with atoms info in
pdb files which seems to be doing good.
I have a very general question.I am aware there is no staright forward
answer to this though.
I am just wondering how many atoms can PyMol handle on a modest machine.
(say 2 Ghz, Geforce 4 - 128mb, 1 GB ram).
What is the biggest dataset you might have loaded and did not have
Please let me know, your answers will help me in taking an educated guess on
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