From: Jason V. <jas...@sc...> - 2011-04-01 21:35:14
|
Greetings PyMOLers, I got back from my trip last night and immediately started putting the new features into the open source branch as promised. I've finished the merge, pushed the changes to SourceForge (revision 3938), and uploaded a tar file (https://sourceforge.net/projects/pymol/files/pymol/1.4/). I'm calling this v1.4b1 (beta one) on the SourceForge site. We will collect bug reports from you, the community, and then release the stable v1.4 official code once the serious bugs are fixed. Additionally, in order to improve communication and openness, I've re-enabled the SourceForge bug tracker (https://sourceforge.net/tracker/?group_id=4546&atid=104546). If someone would like to act as a good steward and help manage the tracker, please let me know. This will help us stay on top of the open-source bugs. For those adventurous enough to try the new code please give it a shot. If you're not familiar with building PyMOL, please wait for the stable v1.4 release. For those wishing to try the new beta release these following notes might help: (1) If you're building from source, please install * glew * glew-devel as they're new dependencies. I'm using glew 1.5.8 on OpenSuSE 11.3. (2) This update requires your hardware to support OpenGL 2.0+. There are known problems running this from within a VM. I think Parallels does handle openGL 2.0+, but VMWare does not yet support it. (3) Please update your video card drivers. My build just failed to compile shaders (at run time) because I had the wrong drivers installed! (4) Volumes don't yet ray trace, but they will soon. For a nice image, "set use_shaders" and also try, Display > Quality > Maximum Quality before using the png command to save the image. (5) cealign is properly integrated and memory leaks and crashing should be fixed. (6) I only made changes to the Linux portion of the setup.sh file. If you're daring enough on Mac/Fink feel free to try get the build working there, too. (7) The 'svn diff' from the last revision is 12000+ lines long, so there's quite a few changes. Cheers, -- Jason -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) Jas...@sc... (o) +1 (603) 374-7120 |
From: Christoph G. <cg...@uc...> - 2011-04-02 01:16:56
Attachments:
stdafx.diff
|
On 4/1/2011 2:34 PM, Jason Vertrees wrote: > Greetings PyMOLers, > > I got back from my trip last night and immediately started putting the > new features into the open source branch as promised. I've finished > the merge, pushed the changes to SourceForge (revision 3938), and > uploaded a tar file > (https://sourceforge.net/projects/pymol/files/pymol/1.4/). I'm > calling this v1.4b1 (beta one) on the SourceForge site. > > We will collect bug reports from you, the community, and then release > the stable v1.4 official code once the serious bugs are fixed. > Additionally, in order to improve communication and openness, I've > re-enabled the SourceForge bug tracker > (https://sourceforge.net/tracker/?group_id=4546&atid=104546). If > someone would like to act as a good steward and help manage the > tracker, please let me know. This will help us stay on top of the > open-source bugs. > > > For those adventurous enough to try the new code please give it a > shot. If you're not familiar with building PyMOL, please wait for the > stable v1.4 release. For those wishing to try the new beta release > these following notes might help: > > (1) If you're building from source, please install > * glew > * glew-devel > as they're new dependencies. I'm using glew 1.5.8 on OpenSuSE 11.3. > > (2) This update requires your hardware to support OpenGL 2.0+. There > are known problems running this from within a VM. I think Parallels > does handle openGL 2.0+, but VMWare does not yet support it. > > (3) Please update your video card drivers. My build just failed to > compile shaders (at run time) because I had the wrong drivers > installed! > > (4) Volumes don't yet ray trace, but they will soon. For a nice > image, "set use_shaders" and also try, > Display> Quality> Maximum Quality > before using the png command to save the image. > > (5) cealign is properly integrated and memory leaks and crashing > should be fixed. > > (6) I only made changes to the Linux portion of the setup.sh file. If > you're daring enough on Mac/Fink feel free to try get the build > working there, too. > > (7) The 'svn diff' from the last revision is 12000+ lines long, so > there's quite a few changes. > > Cheers, > > -- Jason > Thank you. It builds and works well on Windows after removing stdafx.h from layer5/main.c. Christoph |
From: Paul R. <pau...@uc...> - 2011-04-02 05:05:03
|
Thanks for the update, looking forward to testing the new release. Paul -- Paul Rigor http://www.ics.uci.edu/~prigor On Fri, Apr 1, 2011 at 6:16 PM, Christoph Gohlke <cg...@uc...> wrote: > > > On 4/1/2011 2:34 PM, Jason Vertrees wrote: > >> Greetings PyMOLers, >> >> I got back from my trip last night and immediately started putting the >> new features into the open source branch as promised. I've finished >> the merge, pushed the changes to SourceForge (revision 3938), and >> uploaded a tar file >> (https://sourceforge.net/projects/pymol/files/pymol/1.4/). I'm >> calling this v1.4b1 (beta one) on the SourceForge site. >> >> We will collect bug reports from you, the community, and then release >> the stable v1.4 official code once the serious bugs are fixed. >> Additionally, in order to improve communication and openness, I've >> re-enabled the SourceForge bug tracker >> (https://sourceforge.net/tracker/?group_id=4546&atid=104546). If >> someone would like to act as a good steward and help manage the >> tracker, please let me know. This will help us stay on top of the >> open-source bugs. >> >> >> For those adventurous enough to try the new code please give it a >> shot. If you're not familiar with building PyMOL, please wait for the >> stable v1.4 release. For those wishing to try the new beta release >> these following notes might help: >> >> (1) If you're building from source, please install >> * glew >> * glew-devel >> as they're new dependencies. I'm using glew 1.5.8 on OpenSuSE 11.3. >> >> (2) This update requires your hardware to support OpenGL 2.0+. There >> are known problems running this from within a VM. I think Parallels >> does handle openGL 2.0+, but VMWare does not yet support it. >> >> (3) Please update your video card drivers. My build just failed to >> compile shaders (at run time) because I had the wrong drivers >> installed! >> >> (4) Volumes don't yet ray trace, but they will soon. For a nice >> image, "set use_shaders" and also try, >> Display> Quality> Maximum Quality >> before using the png command to save the image. >> >> (5) cealign is properly integrated and memory leaks and crashing >> should be fixed. >> >> (6) I only made changes to the Linux portion of the setup.sh file. If >> you're daring enough on Mac/Fink feel free to try get the build >> working there, too. >> >> (7) The 'svn diff' from the last revision is 12000+ lines long, so >> there's quite a few changes. >> >> Cheers, >> >> -- Jason >> >> > > Thank you. It builds and works well on Windows after removing stdafx.h from > layer5/main.c. > > Christoph > > > ------------------------------------------------------------------------------ > Create and publish websites with WebMatrix > Use the most popular FREE web apps or write code yourself; > WebMatrix provides all the features you need to develop and > publish your website. http://p.sf.net/sfu/ms-webmatrix-sf > > _______________________________________________ > PyMOL-users mailing list (PyM...@li...) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pym...@li... > |
From: Justin L. <j.l...@fz...> - 2011-04-04 09:47:16
Attachments:
smime.p7s
|
Hi Jason, could you please use PYMOL_DATA to determine the location of the shaders dir? it is actually stored in PYMOL_DATA/shaders and with PYMOL_DATA != PYMOL_PATH/data it fails. Thanks justin -- Justin Lecher Institute of Complex Systems ICS-6 Structural Biochemistry Research Centre Juelich 52425 Juelich, Germany phone: +49 2461 61 2117 |
From: Jason V. <jas...@sc...> - 2011-04-04 11:58:00
|
Hi Justin, That sounds like a good idea. Let me make sure the paths are properly defined and located everywhere before we make the change. If all goes well, the changes will be pushed soon. Cheers, -- Jason On Mon, Apr 4, 2011 at 5:46 AM, Justin Lecher <j.l...@fz...> wrote: > Hi Jason, > > could you please use PYMOL_DATA to determine the location of the shaders > dir? it is actually stored in PYMOL_DATA/shaders and with PYMOL_DATA != > PYMOL_PATH/data it fails. > > Thanks justin > -- > Justin Lecher > Institute of Complex Systems > ICS-6 Structural Biochemistry > Research Centre Juelich > 52425 Juelich, Germany > phone: +49 2461 61 2117 > > > > ------------------------------------------------------------------------------ > Create and publish websites with WebMatrix > Use the most popular FREE web apps or write code yourself; > WebMatrix provides all the features you need to develop and > publish your website. http://p.sf.net/sfu/ms-webmatrix-sf > > _______________________________________________ > PyMOL-users mailing list (PyM...@li...) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pym...@li... > -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) Jas...@sc... (o) +1 (603) 374-7120 |
From: Abhinav V. <abh...@gm...> - 2011-04-04 09:50:45
|
Thanks a lot Jason!! Will try it out today!! On Fri, Apr 1, 2011 at 11:34 PM, Jason Vertrees < jas...@sc...> wrote: > Greetings PyMOLers, > > I got back from my trip last night and immediately started putting the > new features into the open source branch as promised. I've finished > the merge, pushed the changes to SourceForge (revision 3938), and > uploaded a tar file > (https://sourceforge.net/projects/pymol/files/pymol/1.4/). I'm > calling this v1.4b1 (beta one) on the SourceForge site. > > We will collect bug reports from you, the community, and then release > the stable v1.4 official code once the serious bugs are fixed. > Additionally, in order to improve communication and openness, I've > re-enabled the SourceForge bug tracker > (https://sourceforge.net/tracker/?group_id=4546&atid=104546). If > someone would like to act as a good steward and help manage the > tracker, please let me know. This will help us stay on top of the > open-source bugs. > > > For those adventurous enough to try the new code please give it a > shot. If you're not familiar with building PyMOL, please wait for the > stable v1.4 release. For those wishing to try the new beta release > these following notes might help: > > (1) If you're building from source, please install > * glew > * glew-devel > as they're new dependencies. I'm using glew 1.5.8 on OpenSuSE 11.3. > > (2) This update requires your hardware to support OpenGL 2.0+. There > are known problems running this from within a VM. I think Parallels > does handle openGL 2.0+, but VMWare does not yet support it. > > (3) Please update your video card drivers. My build just failed to > compile shaders (at run time) because I had the wrong drivers > installed! > > (4) Volumes don't yet ray trace, but they will soon. For a nice > image, "set use_shaders" and also try, > Display > Quality > Maximum Quality > before using the png command to save the image. > > (5) cealign is properly integrated and memory leaks and crashing > should be fixed. > > (6) I only made changes to the Linux portion of the setup.sh file. If > you're daring enough on Mac/Fink feel free to try get the build > working there, too. > > (7) The 'svn diff' from the last revision is 12000+ lines long, so > there's quite a few changes. > > Cheers, > > -- Jason > > -- > Jason Vertrees, PhD > PyMOL Product Manager > Schrodinger, LLC > > (e) Jas...@sc... > (o) +1 (603) 374-7120 > > > ------------------------------------------------------------------------------ > Create and publish websites with WebMatrix > Use the most popular FREE web apps or write code yourself; > WebMatrix provides all the features you need to develop and > publish your website. http://p.sf.net/sfu/ms-webmatrix-sf > _______________________________________________ > PyMOL-users mailing list (PyM...@li...) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pym...@li... > |
From: Tru H. <tr...@pa...> - 2011-04-04 12:05:34
Attachments:
pymol-1.4_3938-Py_ssize_t.patch
|
On Fri, Apr 01, 2011 at 05:34:47PM -0400, Jason Vertrees wrote: > Greetings PyMOLers, > ... For CentOS-5 users, like me ;) > For those adventurous enough to try the new code please give it a > shot. If you're not familiar with building PyMOL, please wait for the > stable v1.4 release. For those wishing to try the new beta release > these following notes might help: > > (1) If you're building from source, please install > * glew > * glew-devel > as they're new dependencies. I'm using glew 1.5.8 on OpenSuSE 11.3. > avalable from rpmforge (1.3.5-1.rf) or epel (1.5.1-3.el5) or rebuild yourself :P CentOS-5 comes with python 2.4 so: gcc -pthread -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -DNO_MMLIBS -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -I/usr/include/python2.4 -c layer4/Cmd.c -o build/temp.linux-x86_64-2.4/layer4/Cmd.o -ffast-math -funroll-loops -O3 layer4/Cmd.c: In function 'CmdCEAlign': layer4/Cmd.c:8698: error: 'Py_ssize_t' undeclared (first use in this function) layer4/Cmd.c:8698: error: (Each undeclared identifier is reported only once layer4/Cmd.c:8698: error: for each function it appears in.) layer4/Cmd.c:8698: error: expected ';' before 'lenA' layer4/Cmd.c:8709: error: 'lenA' undeclared (first use in this function) layer4/Cmd.c:8718: error: 'lenB' undeclared (first use in this function) ... Possible fix at http://www.python.org/dev/peps/pep-0353/ Which I added to layer0/os_python.h, patch attached. Cheers, Tru -- Dr Tru Huynh | http://www.pasteur.fr/recherche/unites/Binfs/ mailto:tr...@pa... | tel/fax +33 1 45 68 87 37/19 Institut Pasteur, 25-28 rue du Docteur Roux, 75724 Paris CEDEX 15 France |
From: Jason V. <jas...@sc...> - 2011-04-04 12:19:49
|
Hi Tru, > For CentOS-5 users, like me ;) >> For those adventurous enough to try the new code please give it a >> shot. If you're not familiar with building PyMOL, please wait for the >> stable v1.4 release. For those wishing to try the new beta release >> these following notes might help: >> >> (1) If you're building from source, please install >> * glew >> * glew-devel >> as they're new dependencies. I'm using glew 1.5.8 on OpenSuSE 11.3. >> > avalable from rpmforge (1.3.5-1.rf) or epel (1.5.1-3.el5) or rebuild yourself :P Thanks for the pointer. > CentOS-5 comes with python 2.4 so: > gcc -pthread -fno-strict-aliasing -DNDEBUG -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fPIC -D_PYMOL_MODULE -D_PYMOL_INLINE -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_OPENGL_SHADERS -DNO_MMLIBS -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -I/usr/include/freetype2 -Imodules/cealign/src -Imodules/cealign/src/tnt -I/usr/include/python2.4 -c layer4/Cmd.c -o build/temp.linux-x86_64-2.4/layer4/Cmd.o -ffast-math -funroll-loops -O3 > layer4/Cmd.c: In function 'CmdCEAlign': > layer4/Cmd.c:8698: error: 'Py_ssize_t' undeclared (first use in this function) > layer4/Cmd.c:8698: error: (Each undeclared identifier is reported only once > layer4/Cmd.c:8698: error: for each function it appears in.) > layer4/Cmd.c:8698: error: expected ';' before 'lenA' > layer4/Cmd.c:8709: error: 'lenA' undeclared (first use in this function) > layer4/Cmd.c:8718: error: 'lenB' undeclared (first use in this function) > ... > > Possible fix at http://www.python.org/dev/peps/pep-0353/ > Which I added to layer0/os_python.h, patch attached. As you have discovered, and I forgot to mention, Python 2.5 or later is now required. This is due to 64-bit types using Py_ssize_t. Cheers, -- Jason -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) Jas...@sc... (o) +1 (603) 374-7120 |
From: Tru H. <tr...@pa...> - 2011-04-04 13:07:21
|
Hi Jason, On Mon, Apr 04, 2011 at 08:19:17AM -0400, Jason Vertrees wrote: > > As you have discovered, and I forgot to mention, Python 2.5 or later > is now required. This is due to 64-bit types using Py_ssize_t. If the patch is the only thing needed to support "Py_ssize_t" for python 2.4 please consider adding it for "backport". Cheers, Tru -- Dr Tru Huynh | http://www.pasteur.fr/recherche/unites/Binfs/ mailto:tr...@pa... | tel/fax +33 1 45 68 87 37/19 Institut Pasteur, 25-28 rue du Docteur Roux, 75724 Paris CEDEX 15 France |
From: Paul R. <pau...@uc...> - 2011-04-06 21:59:34
|
Hi all, So I tried compiling the 1.4b today and came across a couple of issues. 1) The layer3/Executive.c is attempting to include "ce_types.h" locally but the header file is actually under 'modules/cealign/src' 2) With a quick hack, I was able to compile. However, when attempting to run the binary, I get the following error: ImportError: /lv_disk00/preserve/tmp/pymol/modules/pymol/_cmd.so: undefined symbol: _ZNSs4_Rep20_S_empty_rep_storageE However, it seems that there is no missing library dependency (quick check with ldd). Has anyone run into any of these issues. I'm running python 2.6 on a CentOS 5.5 distro on a 64-bit machine. Thanks, paul -- Paul Rigor http://www.ics.uci.edu/~prigor On Mon, Apr 4, 2011 at 6:07 AM, Tru Huynh <tr...@pa...> wrote: > Hi Jason, > > On Mon, Apr 04, 2011 at 08:19:17AM -0400, Jason Vertrees wrote: > > > > As you have discovered, and I forgot to mention, Python 2.5 or later > > is now required. This is due to 64-bit types using Py_ssize_t. > > If the patch is the only thing needed to support "Py_ssize_t" for python > 2.4 > please consider adding it for "backport". > > Cheers, > > Tru > > -- > Dr Tru Huynh | http://www.pasteur.fr/recherche/unites/Binfs/ > mailto:tr...@pa... | tel/fax +33 1 45 68 87 37/19 > Institut Pasteur, 25-28 rue du Docteur Roux, 75724 Paris CEDEX 15 France > > > ------------------------------------------------------------------------------ > Create and publish websites with WebMatrix > Use the most popular FREE web apps or write code yourself; > WebMatrix provides all the features you need to develop and > publish your website. http://p.sf.net/sfu/ms-webmatrix-sf > _______________________________________________ > PyMOL-users mailing list (PyM...@li...) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pym...@li... > |
From: <li...@co...> - 2011-04-06 22:07:52
|
I found the ce_types.h problem happens with autotools, but not with setup.py method. -David On Apr 6, 2011, at 5:59 PM, Paul Rigor <pau...@uc...> wrote: > Hi all, > > So I tried compiling the 1.4b today and came across a couple of issues. > 1) The layer3/Executive.c is attempting to include "ce_types.h" locally but the header file is actually under 'modules/cealign/src' > > 2) With a quick hack, I was able to compile. However, when attempting to run the binary, I get the following error: > ImportError: /lv_disk00/preserve/tmp/pymol/modules/pymol/_cmd.so: undefined symbol: _ZNSs4_Rep20_S_empty_rep_storageE > > However, it seems that there is no missing library dependency (quick check with ldd). > > Has anyone run into any of these issues. I'm running python 2.6 on a CentOS 5.5 distro on a 64-bit machine. > > Thanks, > paul > > -- > Paul Rigor > http://www.ics.uci.edu/~prigor > > > > On Mon, Apr 4, 2011 at 6:07 AM, Tru Huynh <tr...@pa...> wrote: > Hi Jason, > > On Mon, Apr 04, 2011 at 08:19:17AM -0400, Jason Vertrees wrote: > > > > As you have discovered, and I forgot to mention, Python 2.5 or later > > is now required. This is due to 64-bit types using Py_ssize_t. > > If the patch is the only thing needed to support "Py_ssize_t" for python 2.4 > please consider adding it for "backport". > > Cheers, > > Tru > > -- > Dr Tru Huynh | http://www.pasteur.fr/recherche/unites/Binfs/ > mailto:tr...@pa... | tel/fax +33 1 45 68 87 37/19 > Institut Pasteur, 25-28 rue du Docteur Roux, 75724 Paris CEDEX 15 France > > ------------------------------------------------------------------------------ > Create and publish websites with WebMatrix > Use the most popular FREE web apps or write code yourself; > WebMatrix provides all the features you need to develop and > publish your website. http://p.sf.net/sfu/ms-webmatrix-sf > _______________________________________________ > PyMOL-users mailing list (PyM...@li...) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pym...@li... > > ------------------------------------------------------------------------------ > Xperia(TM) PLAY > It's a major breakthrough. An authentic gaming > smartphone on the nation's most reliable network. > And it wants your games. > http://p.sf.net/sfu/verizon-sfdev > _______________________________________________ > PyMOL-users mailing list (PyM...@li...) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pym...@li... |
From: Paul R. <pau...@uc...> - 2011-04-06 23:24:01
|
Hi David, I actually ended up using the python distools instead. However, the viewer flickers =\ Below is the log when starting up PyMol over X-windows from a Mac OS X 10.6.x client. Anyone encounter similar issues? Detected OpenGL version prior to 2.0. Shaders unavailable. OpenGL graphics engine: GL_VENDOR: ATI Technologies Inc. GL_RENDERER: ATI Radeon HD 2600 OpenGL Engine GL_VERSION: 1.4 (2.1 ATI-1.6.26) Adjusting settings to improve performance for ATI cards. Detected 16 CPU cores. Enabled multithreaded rendering. OpenGL quad-buffer stereo 3D detected and enabled Thanks, Paul -- Paul Rigor http://www.ics.uci.edu/~prigor On Wed, Apr 6, 2011 at 3:07 PM, <li...@co...> wrote: > I found the ce_types.h problem happens with autotools, but not with > setup.py method. > > -David > > On Apr 6, 2011, at 5:59 PM, Paul Rigor <pau...@uc...> wrote: > > Hi all, > > So I tried compiling the 1.4b today and came across a couple of issues. > 1) The layer3/Executive.c is attempting to include "ce_types.h" locally but > the header file is actually under 'modules/cealign/src' > > 2) With a quick hack, I was able to compile. However, when attempting to > run the binary, I get the following error: > ImportError: /lv_disk00/preserve/tmp/pymol/modules/pymol/_cmd.so: > undefined symbol: _ZNSs4_Rep20_S_empty_rep_storageE > > However, it seems that there is no missing library dependency (quick check > with ldd). > > Has anyone run into any of these issues. I'm running python 2.6 on a CentOS > 5.5 distro on a 64-bit machine. > > Thanks, > paul > > -- > Paul Rigor > <http://www.ics.uci.edu/~prigor>http://www.ics.uci.edu/~prigor > > > > On Mon, Apr 4, 2011 at 6:07 AM, Tru Huynh < <tr...@pa...>tr...@pa... > > wrote: > >> Hi Jason, >> >> On Mon, Apr 04, 2011 at 08:19:17AM -0400, Jason Vertrees wrote: >> > >> > As you have discovered, and I forgot to mention, Python 2.5 or later >> > is now required. This is due to 64-bit types using Py_ssize_t. >> >> If the patch is the only thing needed to support "Py_ssize_t" for python >> 2.4 >> please consider adding it for "backport". >> >> Cheers, >> >> Tru >> >> -- >> Dr Tru Huynh | <http://www.pasteur.fr/recherche/unites/Binfs/> >> http://www.pasteur.fr/recherche/unites/Binfs/ >> mailto: <tr...@pa...>tr...@pa... | tel/fax +33 1 45 68 87 37/19 >> Institut Pasteur, 25-28 rue du Docteur Roux, 75724 Paris CEDEX 15 France >> >> >> ------------------------------------------------------------------------------ >> Create and publish websites with WebMatrix >> Use the most popular FREE web apps or write code yourself; >> WebMatrix provides all the features you need to develop and >> publish your website. <http://p.sf.net/sfu/ms-webmatrix-sf> >> http://p.sf.net/sfu/ms-webmatrix-sf >> _______________________________________________ >> PyMOL-users mailing list ( <PyM...@li...> >> PyM...@li...) >> Info Page: <https://lists.sourceforge.net/lists/listinfo/pymol-users> >> https://lists.sourceforge.net/lists/listinfo/pymol-users >> Archives: <http://www.mail-archive.com/pym...@li...> >> http://www.mail-archive.com/pym...@li... >> > > > ------------------------------------------------------------------------------ > Xperia(TM) PLAY > It's a major breakthrough. An authentic gaming > smartphone on the nation's most reliable network. > And it wants your games. > http://p.sf.net/sfu/verizon-sfdev > > _______________________________________________ > PyMOL-users mailing list (PyM...@li...) > Info Page: <https://lists.sourceforge.net/lists/listinfo/pymol-users> > https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: <http://www.mail-archive.com/pym...@li...> > http://www.mail-archive.com/pym...@li... > > |
From: Michael B. <mb...@de...> - 2011-04-18 20:00:12
|
Hi, On Fri, Apr 01, 2011 at 05:34:47PM -0400, Jason Vertrees wrote: > I got back from my trip last night and immediately started putting the > new features into the open source branch as promised. I've finished > the merge, pushed the changes to SourceForge (revision 3938), and > uploaded a tar file > (https://sourceforge.net/projects/pymol/files/pymol/1.4/). I'm > calling this v1.4b1 (beta one) on the SourceForge site. Build and works fine on Debian (though I only tested it lightly), I have now uploaded it to Debian experimental (and 1.3r2 to unstable finally, while I was at it). Cheers, Michael |