From: Justin L. <j.l...@fz...> - 2011-11-13 12:11:58
Attachments:
smime.p7s
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Hi, while trying this http://kpwu.wordpress.com/2011/11/12/pymol-sidechain-helper-in-the-cartoon-view/ I recognised that the "color by atom type" function doesn't work anymore if the sidechain helper is on. Bug or feature? Could we enable it? Thanks justin -- Justin Lecher Institute of Complex Systems ICS-6 Structural Biochemistry Research Centre Juelich 52425 Juelich, Germany phone: +49 2461 61 2117 |
From: Jason V. <jas...@sc...> - 2011-11-13 17:17:16
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Hi Justin, It works; see http://www.pymolwiki.org/index.php/File:Cartoon_side_chain_helper_on.png. You just have to color by atom type after coloring by secondary structure: set cartoon_sidechain_helper, on C > Color > by ss > Helix (red) Sheet (yellow) Loop (green) C > Color > by element > ... Cheers, -- Jason On Sun, Nov 13, 2011 at 7:11 AM, Justin Lecher <j.l...@fz...> wrote: > Hi, > > while trying this > > http://kpwu.wordpress.com/2011/11/12/pymol-sidechain-helper-in-the-cartoon-view/ > > I recognised that the "color by atom type" function doesn't work anymore > if the sidechain helper is on. Bug or feature? Could we enable it? > > Thanks justin > > -- > Justin Lecher > Institute of Complex Systems > ICS-6 Structural Biochemistry > Research Centre Juelich > 52425 Juelich, Germany > phone: +49 2461 61 2117 > > > > ------------------------------------------------------------------------------ > RSA(R) Conference 2012 > Save $700 by Nov 18 > Register now > http://p.sf.net/sfu/rsa-sfdev2dev1 > _______________________________________________ > PyMOL-users mailing list (PyM...@li...) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pym...@li... > -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) Jas...@sc... (o) +1 (603) 374-7120 |
From: Justin L. <j.l...@fz...> - 2011-11-14 10:22:06
Attachments:
smime.p7s
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Strange, yesterday I did a quick test and it didn't work. But here on my main machine everything is fine. Sorry for the noice. jsutin On 13/11/11 17:48, Jason Vertrees wrote: > Hi Justin, > > It works; see http://www.pymolwiki.org/index.php/File:Cartoon_side_chain_helper_on.png. > You just have to color by atom type after coloring by secondary > structure: > > set cartoon_sidechain_helper, on > > C > Color > by ss > Helix (red) Sheet (yellow) Loop (green) > > C > Color > by element > ... > > Cheers, > > -- Jason > > On Sun, Nov 13, 2011 at 7:11 AM, Justin Lecher <j.l...@fz...> wrote: >> Hi, >> >> while trying this >> >> http://kpwu.wordpress.com/2011/11/12/pymol-sidechain-helper-in-the-cartoon-view/ >> >> I recognised that the "color by atom type" function doesn't work anymore >> if the sidechain helper is on. Bug or feature? Could we enable it? >> >> Thanks justin >> >> -- >> Justin Lecher >> Institute of Complex Systems >> ICS-6 Structural Biochemistry >> Research Centre Juelich >> 52425 Juelich, Germany >> phone: +49 2461 61 2117 >> >> >> >> ------------------------------------------------------------------------------ >> RSA(R) Conference 2012 >> Save $700 by Nov 18 >> Register now >> http://p.sf.net/sfu/rsa-sfdev2dev1 >> _______________________________________________ >> PyMOL-users mailing list (PyM...@li...) >> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users >> Archives: http://www.mail-archive.com/pym...@li... >> > > > -- Justin Lecher Institute of Complex Systems ICS-6 Structural Biochemistry Research Centre Juelich 52425 Juelich, Germany phone: +49 2461 61 2117 |