From: Anastassis P. <a.p...@nk...> - 2007-03-29 12:51:12
|
Dear pymolers - One can store 'Scenes' and then switch between them; the algorithm that goes from one scene to each other is very nice. Can one ask Pymol to write frames going from one scene to another to png files to make a movie ? or does anyone have python code that can render the transitions between views/scenes in a different way ? best - tassos |
From: Dirk K. <dir...@ps...> - 2007-03-30 08:31:23
|
Hi Tassos, I found the following article, but haven't tried it on my own: http://www.pymolwiki.org/index.php/Scene I hope this helps! Best regards, Dirk. Anastassis Perrakis wrote: > Dear pymolers - > > One can store 'Scenes' and then switch between them; the algorithm > that goes from one scene to each other is very nice. > > Can one ask Pymol to write frames going from one scene to another to > png files to make a movie ? > > or does anyone have python code that can render the transitions > between views/scenes in a different way ? > > best - tassos > > > ------------------------------------------------------------------------- > Take Surveys. Earn Cash. Influence the Future of IT > Join SourceForge.net's Techsay panel and you'll get the chance to share your > opinions on IT & business topics through brief surveys-and earn cash > http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV > _______________________________________________ > PyMOL-users mailing list > PyM...@li... > https://lists.sourceforge.net/lists/listinfo/pymol-users -- **************************************** Dirk Kostrewa Paul Scherrer Institut Biomolecular Research, OFLC/110 CH-5232 Villigen PSI, Switzerland Phone: +41-56-310-4722 Fax: +41-56-310-5288 E-mail: dir...@ps... http://sb.web.psi.ch **************************************** |
From: Andreas F. <doc...@gm...> - 2007-04-10 10:49:51
|
Tassos, Dirk, sorry for the very late reply, but I've just now finished going through a few hundred list mails that had accumulated. For converting scenes to movies, Joel Bard's slerpy is really shweet. Check it out at http://www.pymolwiki.org/index.php/Slerpy. What I do is the following - after putting slerpy's two scripts into the current directory and opening pymol: - load session.pse - import slerpy - F1 (or wherever your first scene resides) - sscene (makes slerpy understand scene 1) - F2 - sscene (makes slerpy understand scene 2) - swrite arbitraryName (saves parameters for interpolation) - srecord (does the interpolation) - set ray_trace_frames, 1 (makes sure your images are ray-traced before they are saved) - mpng anotherName (writes out 50 images covering the interpolation from scene 1 to scene 2) - go have a coffee - make movie from images in ImageReady I was amazed. This worked exactly as I had expected. The most taxing part was walking to the coffee machine. Thanks, Joel! Andreas On 3/30/07, Dirk Kostrewa <dir...@ps...> wrote: > > Hi Tassos, > > I found the following article, but haven't tried it on my own: > > http://www.pymolwiki.org/index.php/Scene > > I hope this helps! > > Best regards, > > Dirk. > > Anastassis Perrakis wrote: > > Dear pymolers - > > > > One can store 'Scenes' and then switch between them; the algorithm > > that goes from one scene to each other is very nice. > > > > Can one ask Pymol to write frames going from one scene to another to > > png files to make a movie ? > > > > or does anyone have python code that can render the transitions > > between views/scenes in a different way ? > > > > best - tassos > > > > |
From: Dirk K. <dir...@ps...> - 2007-04-16 08:18:11
|
Hi Andreas, thanks for that pointer - sounds pretty easy. I'll give it a try next time! Best regards, Dirk. Andreas Forster wrote: > Tassos, Dirk, > > sorry for the very late reply, but I've just now finished going through a > few hundred list mails that had accumulated. > > For converting scenes to movies, Joel Bard's slerpy is really shweet. > Check > it out at http://www.pymolwiki.org/index.php/Slerpy. > > What I do is the following - after putting slerpy's two scripts into the > current directory and opening pymol: > - load session.pse > - import slerpy > - F1 (or wherever your first scene resides) > - sscene (makes slerpy understand scene 1) > - F2 > - sscene (makes slerpy understand scene 2) > - swrite arbitraryName (saves parameters for interpolation) > - srecord (does the interpolation) > - set ray_trace_frames, 1 (makes sure your images are ray-traced before > they > are saved) > - mpng anotherName (writes out 50 images covering the interpolation from > scene 1 to scene 2) > - go have a coffee > - make movie from images in ImageReady > > I was amazed. This worked exactly as I had expected. The most taxing part > was walking to the coffee machine. Thanks, Joel! > > > Andreas > > > On 3/30/07, Dirk Kostrewa <dir...@ps...> wrote: >> >> Hi Tassos, >> >> I found the following article, but haven't tried it on my own: >> >> http://www.pymolwiki.org/index.php/Scene >> >> I hope this helps! >> >> Best regards, >> >> Dirk. >> >> Anastassis Perrakis wrote: >> > Dear pymolers - >> > >> > One can store 'Scenes' and then switch between them; the algorithm >> > that goes from one scene to each other is very nice. >> > >> > Can one ask Pymol to write frames going from one scene to another to >> > png files to make a movie ? >> > >> > or does anyone have python code that can render the transitions >> > between views/scenes in a different way ? >> > >> > best - tassos >> > >> >> > -- **************************************** Dirk Kostrewa Paul Scherrer Institut Biomolecular Research, OFLC/110 CH-5232 Villigen PSI, Switzerland Phone: +41-56-310-4722 Fax: +41-56-310-5288 E-mail: dir...@ps... http://sb.web.psi.ch **************************************** |