The Povray intermediate file generated when you do 'ray renderer = 1'
contains all vertices, normals and colouring information for cartoon
and surface object types. However you do need to produce a parsing
script to extract these in to a useful form for importing into other
programs. Have a look at the front cover of Mol Cell vol 20(4) - I
generated a cartoon of the protein in PyMol, output it as a povray
file, and then converted it to VRML using a jiffy produced by Chris
Richardson, and then used it as an object in the Blender 3D modelling
package to generate the picture.
Of course it would be a whole lot easier if PyMol output VRML directly
..... Warren ?????
Laurence Pearl
On 15 Mar 2006, at 17:01, Benjamin Hitz wrote:
>>
>> I am interested in the coordinates of the vertices of the mesh
>> representation of the molecular surface. Is there any method to read
>> them out?
>>
>> Thanks
>>
>
> Me too. With coloring and/or other "property" information as well.
>
>
>
> --
> Ben Hitz
> Senior Scientific Programmer ** Saccharomyces Genome Database ** GO
> Consortium
> Stanford University ** hi...@ge...
>
>
>
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Laurence H. Pearl
Section of Structural Biology, Institute of Cancer Research
Chester Beatty Laboratories, 237 Fulham Road, London SW3 6JB, UK
Phone +44-(0)20 7153 5422 : Secretary +44-(0)20 7153 5443
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