[PyMOL] Fe in heme disappears

[Joel T. <joe...@ot...>]

Hi All,

I’m trying to make a pretty picture of a protein containing  a heme and ligand. Previously I could delete the bonds (using builderthat pymol shows for coordination as I prefer to not show them as stick form and then “show nb_sphere” to show the metal ion. I can no longer do this (Fe doesn’t show as nb_sphere). When I select the HEM in SEQ view, it is still there but I cant . It is part of the HEM residue no a single ion.

Using 4WMZ; PyMOL 3.1.3

Any suggestions?

J

[University of Otago]
Professor Joel Tyndall
BSc(Hons) PhD

School of Pharmacy | He Rau Kawakawa
University of Otago | Ōtākou Whakaihu Waka
Mobile/Waea pūkoro +64 21 051 0940

Dunedin | Ōtepoti
PO Box 56, Dunedin 9054
New Zealand | Aotearoa