From: Lei Q. <lei...@ou...> - 2025-02-06 16:54:36
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Dear users, Could I ask a question on geometry option in replace command? I tried to use Build/Fragment/XXX to replace an atom to a new one, and pymol GUI shows the corresponding replace command. However, I found the geometry option always equals to 4. For example, PyMOL>replace O, 4, 2 PyMOL>replace N, 4, 3 PyMOL>replace C, 4, 4 I tried to replace the atom in different types of bonds: single/double/triple bonds, but the geometry value is always 4. Could you please help me figure it out? Thank you very much! Best, Lei |