Re: [PyMOL] Visualisation clashed structures

[Jarrett J. <jar...@sc...>]

Hello,

Hard to say at first glance, but it may be easier to postulate if we have
an example file that hangs.

Best,
Jarrett J

On Wed, Oct 30, 2024 at 7:57 PM Magnus, Marcin <mm...@fa...>
wrote:

> Hey,
>
> I’m working a new method for RNA 3D structure prediction. And yeah, I see
> that the structure is a mess, but I want to be able to load the structure
> into PyMOL. I can do that with Chimera, but PyMOL apparently is trying to
> do something, and this something takes forever to load the model. I love
> PyMOL and have lots of my own plugins to work with RNA 3D structures, I
> would love to be able to use PyMOL for analysis what’s going on in here.
>
> Any ideas, hints, why it takes so long to load it. Is it that PyMOL is
> calculcate bonds between all the atoms and it’s getting overwhelmed but
> this mess?
>
> Any hints are welocome,
>
> Magnus
>
> Elena Rivas lab, MCB, Harvard
> mm...@fa...
> https://mmagnus.github.io/
>
> [image: sc 2024-10-30 at 13.27.07.jpeg.jpeg]
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-- 

*Jarrett Johnson* | Senior Developer, PyMOL