Re: [PyMOL] BCIF

[Jarrett J. <jar...@sc...>]

Hi Robert,

BinaryCIF is already available in PyMOL open-source master
<https://github.com/schrodinger/pymol-open-source/pull/353>. This is
expected to be shipped with a patched PyMOL 2.6 LTS next week and PyMOL 3.1
when that version is shipped.

Best,
Jarrett J.

On Wed, Jul 17, 2024 at 1:23 PM Robert Hanson via PyMOL-users <
pym...@li...> wrote:

> Seeing as MMTF is being deprecated, I am wondering if efforts are underway
> to allow PyMOL to read the BinaryCIF format?
>
> Bob Hanson
>
> From July 2024 the PDB file archive will not be offered in the compressed
>> MMTF format anymore. Users are strongly encouraged to switch to the BinaryCIF
>> format <https://github.com/molstar/BinaryCIF>, which has been available
>> since 2020. Details on how to access BinaryCIF (BCIF) data files for the
>> entire PDB archive are available here
>> <https://www.rcsb.org/docs/programmatic-access/file-download-services#pdb-entry-files>
>> .
>
>
>> RCSB PDB support is ready to assist with any issues or questions at
> in...@rc....
>
>
>
> ---
> Jose Duarte
> RCSB Protein Data Bank
> San Diego Supercomputer Center
> UC San Diego
> La Jolla CA, USA
>
>
>
>
> --
> Robert M. Hanson
> Professor of Chemistry, Emeritus
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
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-- 

*Jarrett Johnson* | Senior Developer, PyMOL