[PyMOL] parameters for cation-pi identification

[Julien B. <jul...@ki...>]

Dear All,
I am wondering what parameters (cutoff distance, angles, side chains relative orientations) are used by the functions implemented in pymol (distance (mode =7 and A>find>pi-cation))to define cation-pi interaction. I didn’t find it in the documentation. Is there any way to eventually tune these parameters?

Thank you for your responses,
Best,
Julien




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