Re: [PyMOL] Secondary structure assignments

[Kristian R. <kri...@be...>]

OK, heres what we've got:

The DSSP program is available for Linux and Windows from
http://www.cmbi.kun.nl/swift/dssp/ .

I have written a Python script that parses the output of DSSP and alters 
the annotation in PyMOL. You just start the script, then You have a

dssp <object>

command available.

The script can be found on my homepage,

http://www.rubor.de/bioinf/pymol_extensions.html

along with some useful stuff

http://www.rubor.de/bioinf/index.html

However, the script works for sure only on Unix. For Windows, i still 
need to figure out how to
- redirect the output of Dssp on Windows
- assign platform-independent Paths correctly.

If someone could test the script, that would be great.


Kristian