Re: [PyMOL] Dss when creating movie from dcd traj

[Norbert S. <st...@bb...>]

Hi Effie,

try to load the trajectory with the option discrete=1:

load trajectory.dcd, discrete=1

Best,

Norbert

Am 09.11.2023 um 19:38 schrieb Effie Artikis:
> Hello,
>
> I’ve uploaded my MD simulation and am trying to create a movie but 
> I’ve noticed that when I play the MD simulation, the secondary 
> structure isn’t updated frame by frame. For example, although it is an 
> unfolding simulation the protein maintains the secondary structure of 
> the initial frame throughout the trajectory. Employing the dss command 
> for any frame applies those secondary structural characteristics to 
> the rest of the frames in the trajectory. Is there a way to update the 
> dss for each frame as the simulation plays?
>
> Thanks!
>
>
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