Re: [PyMOL] Question about glm in pymol

[张敏华 <mhz...@si...>]

Dear Jarrett Johnson：
        In fact I encountered an error message when I am installing the latest version of pymol.  First I installed all the library that needed according the pymolwiki by yum.  Then during the installation process, an error message appeared:
  
       “ layer0/TTT.cpp:87:27: error: no match for ‘operator=’ (operand types are ‘glm::vec3 {aka glm::tvec3<float, (glm::precision)0u>}’ and ‘glm::tmat4x4<float, (glm::precision)0u>::col_type {aka glm::tvec4<float, (glm::precision)0u>}’)
   result.m_pretranslation = mult[3];

         <other  outputs>

        error:  command 'g++’failed with exit status 1”

       So I guess there might be something wrong with glm, but I don't know how to solve it. Maybe the glm version installed by yum in CentOS7 is not the latest version? I searched the google and some threads suggests that should use the glm-0.9.9 instead yum installed glm-0.9.6. Then how to use the glm-0.9.9? 





Minhua Zhang, Ph.D., Assistant Professor
Structural Biology Lab
Institute of Plant Physiology and Ecology, Shanghai Institute of Biological Sciences
Chinese Academy of Sciences
300 Fenglin Road, Shanghai, 20032, P.R.China
Tel:  86 21 5492 4218
Fax:  86 21 5492 4015 
Email: mh...@si...
 
From: Jarrett Johnson
Date: 2022-07-13 00:33
To: 张敏华
CC: pymol-users
Subject: Re: [PyMOL] Question about glm in pymol
Hello,

Through CentOS, you should be able to install glm with yum package manager.

yum install glm-devel

More info can be found here: https://pymolwiki.org/index.php/Linux_Install .

Also take note that if you're using Centos 7, the default glm may not have a modern enough API for PyMOL code. I updated the codebase today which should make it compatible with this version of glm. Make sure to pull again if that's the case for you. 

Best,
Jarrett J

On Tue, Jul 12, 2022 at 12:26 PM 张敏华 <mhz...@si...> wrote:
Dear all:
        I want to comple open-source-pymol in CentOS. So I want to using the latest glm. So how to install glm? or  I just put the glm folder into the include folder in the open-sourde-pymol folder?



Minhua Zhang, Ph.D., Assistant Professor
Structural Biology Lab
Institute of Plant Physiology and Ecology, Shanghai Institute of Biological Sciences
Chinese Academy of Sciences
300 Fenglin Road, Shanghai, 20032, P.R.China
Tel:  86 21 5492 4218
Fax:  86 21 5492 4015 
Email: mh...@si...
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Jarrett Johnson | Senior Developer, PyMOL