Re: [PyMOL] Help - how mutation affects protein structure

[Sorin D. <sor...@gm...>]

Hi Susanna,

As you can see, pymol allows you to mutate residues. However, in order to
assess their influence, you should most likely run MD simulations on both
the wild type protein and mutant(s) and compare.

Kind  regards,

Sorin

On Tue, Apr 12, 2022, 5:35 PM susanna pagni <pag...@gm...> wrote:

> Hello,
>
> I am quite new to PyMOL. I would like to assess how an amino acid change
> might affect the protein structure. I used the Wizard Mutagenesis to change
> the amino acid of interest but don’t know how I can see how the protein
> structure is affected by the mutation.
>
> Can you please help me with this?
>
> Many thanks in advance.
>
> Best wishes,
> Susanna
>
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