Re: [PyMOL] Missing structure

[Marko H. <mh...@ca...>]

Looks like you have half a dimer in asymmetric unit which is what PDB depositions would have. You can either see if you can download the biological complex or, within PyMOL, you can find symmetry mates from Action menu for the object. After that you need to remove those that are not related to dimeric complex.

Best, Marko

----
Marko Hyvonen
Department of Biochemistry
University of Cambridge
https://hyvonen.bioc.cam.ac.uk
@HyvonenGroup
mh...@ca...
________________________________
From: JJ Oliveira <joa...@gm...>
Sent: Wednesday, December 8, 2021 2:54:31 PM
To: PYMOLBB <PyM...@li...>
Subject: [PyMOL] Missing structure

Hi there

PyMol doesn't show the full PDB file 1BG1 (TRANSCRIPTION FACTOR STAT3B/DNA COMPLEX) as shown in rcsb.org<http://rcsb.org> (2nd attached image).

How do I fix that?

Thank you!

[image.png]
[image.png]