Re: [PyMOL] Help ASPB

[David G. <dd...@uc...>]

select pos,(resn arg+lys+his)
show sticks, (pos and !name c+n+o)
color marine,pos
disable pos
select neg,(resn glu+asp)
show sticks, (neg and !name c+n+o)
color red,neg
disable neg
select neutral, (resn gly+ala+val+ile+leu+met+ser+cys+trp+phe+tyr+pro+gln+asn+phe)
show sticks, (neutral and !name c+n+o)
color yellow, neutral

I might have missed the amino acid grouping, I hope you check it before you use it.  
Hope this helps,



> On Sep 9, 2020, at 4:28 AM, Clarisa Alvarez <cla...@gm...> wrote:
> 
> GenScript
> Dear all, Thanks in advance.
> I have this problem, I have two pockets with electrostatic potential made by APSB, does anyone know how I could tell which residue contributes to each potential in each protein?
> Thanks in advance.
> Regards,
> Clarisa.
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