[PyMOL] Compare two structures with the same connectivity but different stereochemistry?

[Peng Yu <pen...@gm...>]

I'd like to compare the difference between the two structures which
have the same connectivity but different stereochemistry. Could
anybody show me if there is a way to do so in pymol? Thanks.

http://tcmspw.com/tcmspmol/MOL002088.mol2
http://tcmspw.com/tcmspmol/MOL002424.mol2

-- 
Regards,
Peng